fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G80580.1 NLEKMGLELDLSLGLL at 242/256 in AT1G80580.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt029981 GGGNVELDLKLATGLG in 272/300 AT1G80580.1 1st_1st 0.266009852 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G80580.1     MENSYTVDGHRLQYSVPLSSMHETSQNSETYGLSKESPLVCMPLFETNTT----------
pt029981_POPTR_ MNNQKLL-------PIPFFPKPETYHLSEMFRLLTENSSFCGSLLQPQNSFSSPFTSNHY
                *:*.  :       .:*: .  ** : ** : * .*.. .* .*::.:.:          

AT1G80580.1     --------SFDISSLFS---FNPKPEPENTHRVMDDSIAAVVGENVLFGDKN----KVSD
pt029981_POPTR_ DPSAYFPVSTDISAIVSLPGFIKKP-PE-TPPVL-DGIGAVVGQEVLFGTTNTKNSETSD
                        * ***::.*   *  ** ** *  *: *.*.****::**** .*    :.**

AT1G80580.1     HL-------TKEGGVKRGRK-------MP-QKTGGFMGVRKRPWGRWSAEIRDRIGRCRH
pt029981_POPTR_ FASISKRIGSKERKHERGAKRNCANNGVPVQRT--YRGVRKRPWGRWSAEIRDRIGRCRH
                .        :**   :** *       :* *:*  : ***********************

AT1G80580.1     WLGTFDTAEEAARAYDAAARRLRGTKAKTNFVIPPLF---------PKEIAQAQEDNRMR
pt029981_POPTR_ WLGTFDTAEEAARAYDAAARRLRGAKARTNFEIPPVLPPISSSPSPPNACSSSSLNNAEV
                ************************:**:*** ***::         *:  :.:. :*   

AT1G80580.1     QKQKKKKKKKV---SVRKCVKVTSVAQLFDDANFINSSSIKGNVISSIDNLEKMGLELDL
pt029981_POPTR_ KRRTNNSNNKLIGNGGRKCAVVTSVAHLF--------SNFEGKGTSGGGNVE---LDLKL
                :::.::.::*:   . ***. *****:**        *.::*:  *. .*:*   *:*.*

AT1G80580.1     SLGLLSRK---------------
pt029981_POPTR_ ATGLGGHHDGNKSAASAPPSMVV
                : ** .::
BoxShade v3.31 C (beta, 970507) Output
AT1G80580.1     M E N S Y T V D G H R L Q Y S V P L S S M H E T S Q N S E T Y G L S K E S P L V C M P L F E T N T T - - - - - - - - - -
pt029981_POPTR_    M N N Q K L L - - - - - - - P I P F F P K P E T Y H L S E M F R L L T E N S S F C G S L L Q P Q N S F S S P F T S N H Y
 
AT1G80580.1     - - - - - - - - S F D I S S L F S - - - F N P K P E P E N T H R V M D D S I A A V V G E N V L F G D K N - - - - K V S D
pt029981_POPTR_    D P S A Y F P V S T D I S A I V S L P G F I K K P - P E - T P P V L - D G I G A V V G Q E V L F G T T N T K N S E T S D
 
AT1G80580.1     H L - - - - - - - T K E G G V K R G R K - - - - - - - M P - Q K T G G F M G V R K R P W G R W S A E I R D R I G R C R H
pt029981_POPTR_    F A S I S K R I G S K E R K H E R G A K R N C A N N G V P V Q R T - - Y R G V R K R P W G R W S A E I R D R I G R C R H
 
AT1G80580.1     W L G T F D T A E E A A R A Y D A A A R R L R G T K A K T N F V I P P L F - - - - - - - - - P K E I A Q A Q E D N R M R
pt029981_POPTR_    W L G T F D T A E E A A R A Y D A A A R R L R G A K A R T N F E I P P V L P P I S S S P S P P N A C S S S S L N N A E V
 
AT1G80580.1     Q K Q K K K K K K K V - - - S V R K C V K V T S V A Q L F D D A N F I N S S S I K G N V I S S I D N L E K M G L E L D L
pt029981_POPTR_    K R R T N N S N N K L I G N G G R K C A V V T S V A H L F - - - - - - - - S N F E G K G T S G G G N V E - - - L D L K L
 
AT1G80580.1     S L G L L S R K - - - - - - - - - - - - - - -
pt029981_POPTR_    A T G L G G H H D G N K S A A S A P P S M V V
 
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