fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G80580.1 NLEKMGLELDLSLGLL at 242/256 in AT1G80580.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm022113 not found in 95aa AT1G80580.1 1st_1st 0.231527093 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G80580.1     MENSYTVDGHRLQYSVPLSSMHETSQNSETYGLSKESPLVCMPLFETNTTSFDISSLFSF
gm022113_Glyma0 -----------------------------------------------------------M
                                                                           :

AT1G80580.1     NPKPEPENTHRVMDDSIAAVVGENVLFGDKNKVSDHLTKEGGVKRGRKMPQKTGGFMGVR
gm022113_Glyma0 NP---------------------------------------------------------F
                **                                                          

AT1G80580.1     KRPWG-RWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARR-LRGTKAKTNFVIPPLFP
gm022113_Glyma0 RRKWQHRWYLEVGSRL-----------RPPQAPRRRVVRTRRLLRGVEGPQPMAAP---P
                :* *  **  *: .*:            . :*.*   . :** ***.:.   :. *   *

AT1G80580.1     KEIAQAQEDNRMRQKQKKKKKKKVSV---RKCVKVTSVAQLFDDANFINSSSIKGNVISS
gm022113_Glyma0 DAVAY------LRRPPPPRSLPHSSVALAHRC------------------------LLRS
                . :*       :*:    :.  : **   ::*                        :: *

AT1G80580.1     IDNLEKMGL-ELDLSLGLLSRK
gm022113_Glyma0 LRNMRRRCRSEEDMF-------
                : *:.:    * *:
BoxShade v3.31 C (beta, 970507) Output
AT1G80580.1     M E N S Y T V D G H R L Q Y S V P L S S M H E T S Q N S E T Y G L S K E S P L V C M P L F E T N T T S F D I S S L F S F
gm022113_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M
 
AT1G80580.1     N P K P E P E N T H R V M D D S I A A V V G E N V L F G D K N K V S D H L T K E G G V K R G R K M P Q K T G G F M G V R
gm022113_Glyma0    N P - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - F
 
AT1G80580.1     K R P W G - R W S A E I R D R I G R C R H W L G T F D T A E E A A R A Y D A A A R R - L R G T K A K T N F V I P P L F P
gm022113_Glyma0    R R K W Q H R W Y L E V G S R L - - - - - - - - - - - R P P Q A P R R R V V R T R R L L R G V E G P Q P M A A P - - - P
 
AT1G80580.1     K E I A Q A Q E D N R M R Q K Q K K K K K K K V S V - - - R K C V K V T S V A Q L F D D A N F I N S S S I K G N V I S S
gm022113_Glyma0    D A V A Y - - - - - - L R R P P P P R S L P H S S V A L A H R C - - - - - - - - - - - - - - - - - - - - - - - - L L R S
 
AT1G80580.1     I D N L E K M G L - E L D L S L G L L S R K
gm022113_Glyma0    L R N M R R R C R S E E D M F - - - - - - -
 
0