fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G80590.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb026014 GARRRRLRLQLLGVRG in 261/425 AT1G80590.1 1st_1st 0.177551020 Ib
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G80590.1     MSLEIDAKAVSALLLGQGCANNLKTLLKNHETGSVSTEPLINSILDSFSFALSSQNIPRH
Sb026014_Sorbi1 VVTHYCSVGLTVLTYG------VHVLQRRRQHMSSPDLPLVCCCYSKNNLLLKRSDV---
                :  .  : .::.*  *      ::.* :.::  * .  **: .  .. .: *. .::   

AT1G80590.1     VSQRSSKKKMCGIQGMEDSPTPAHIDGFIWRKYGQKTIKTSPHQRWYYRCAYAKDQNCDA
Sb026014_Sorbi1 ---------------MEEE--PAEVGAVLEDGFPSEAAVQELHHRIRSSRVVPLVQRLEV
                               **:.  **.:...:   : .::   . *:*     . .  *. :.

AT1G80590.1     TKRVQKIQDNPPVYR-------NTYVGQHACEAPAYAVNNGGTYGSKMIK----FDYVIP
Sb026014_Sorbi1 EPDLGRRRRRPPSLRHGGRRRASVVVGIRGPPGVGAEVDDGGRRSQLLPRGGRALARVVP
                   : : : .**  *       .. ** :.  . .  *::**  .. : :    :  *:*

AT1G80590.1     ---------------------------ESVMPQPLSIDSQEITMEDKDTDDHILNYINEH
Sb026014_Sorbi1 VVGDLVRRRLVLRLLHPPGRVASLVLVRAAVVEPRVLVSVDVLLPVLPPDEAVHRRAAGH
                                           .:.: :*  : * :: :    .*: : .    *

AT1G80590.1     L----------ME-----------------------------------------DEAYDV
Sb026014_Sorbi1 LPGRLRAARPSLEWRTRRRRRRRPGGASRCCCVLVVLGRRRLPLAPVGGGPERVDDAAAA
                *          :*                                         *:*  .

AT1G80590.1     FPDVLGE-------RCCFGLEPFP-----------------GLNINKS------------
Sb026014_Sorbi1 AEDLGGELLVRRRRRGGRGPEQVPEVRRGLLPHGHQLQHHGGRGVQRHGCRCSMLSFLGS
                  *: **       *   * * .*                 * .:::             

AT1G80590.1     ----------
Sb026014_Sorbi1 TDASARVLLC
BoxShade v3.31 C (beta, 970507) Output
AT1G80590.1     M S L E I D A K A V S A L L L G Q G C A N N L K T L L K N H E T G S V S T E P L I N S I L D S F S F A L S S Q N I P R H
Sb026014_Sorbi1    V V T H Y C S V G L T V L T Y G - - - - - - V H V L Q R R R Q H M S S P D L P L V C C C Y S K N N L L L K R S D V - - -
 
AT1G80590.1     V S Q R S S K K K M C G I Q G M E D S P T P A H I D G F I W R K Y G Q K T I K T S P H Q R W Y Y R C A Y A K D Q N C D A
Sb026014_Sorbi1    - - - - - - - - - - - - - - - M E E E - - P A E V G A V L E D G F P S E A A V Q E L H H R I R S S R V V P L V Q R L E V
 
AT1G80590.1     T K R V Q K I Q D N P P V Y R - - - - - - - N T Y V G Q H A C E A P A Y A V N N G G T Y G S K M I K - - - - F D Y V I P
Sb026014_Sorbi1    E P D L G R R R R R P P S L R H G G R R R A S V V V G I R G P P G V G A E V D D G G R R S Q L L P R G G R A L A R V V P
 
AT1G80590.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - E S V M P Q P L S I D S Q E I T M E D K D T D D H I L N Y I N E H
Sb026014_Sorbi1    V V G D L V R R R L V L R L L H P P G R V A S L V L V R A A V V E P R V L V S V D V L L P V L P P D E A V H R R A A G H
 
AT1G80590.1     L - - - - - - - - - - M E - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - D E A Y D V
Sb026014_Sorbi1    L P G R L R A A R P S L E W R T R R R R R R R P G G A S R C C C V L V V L G R R R L P L A P V G G G P E R V D D A A A A
 
AT1G80590.1     F P D V L G E - - - - - - - R C C F G L E P F P - - - - - - - - - - - - - - - - - G L N I N K S - - - - - - - - - - - -
Sb026014_Sorbi1    A E D L G G E L L V R R R R R G G R G P E Q V P E V R R G L L P H G H Q L Q H H G G R G V Q R H G C R C S M L S F L G S
 
AT1G80590.1     - - - - - - - - - -
Sb026014_Sorbi1    T D A S A R V L L C
 
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