fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G80730.1 KQGHQDLELGLTLLSR at 20/228 in AT1G80730.1
QFKKIDLTLKL at 222/228 in AT1G80730.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm014285 QEEMKHLDLSLKL in 286/293 AT1G80730.1 1st_1st 0.331775700 Ib
Pt008466 DDRIHKLDLSLKL in 245/252 AT1G80730.1 1st_1st 0.366822429 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G80730.1     --------------ME---------------------PS--IKGDQE--ML----KIKKQ
gm014285_Glyma0 MNLPITRARGEYSAMETLSHESPFYDNNLSAEKTPPSPSTPLQNPQEKKQL----SVKEQ
pt008466_POPTR_ --------------MESLVRR----ESSITAPQAPPLQSS-EENEQE--LLDEVNDQKEE
                              **                      *   :. **   *    . *::

AT1G80730.1     GHQDLELGLTLLSRG----TATSSELNLIDSFKT-S-SSSTSHHQHQQEQLADPRVFSCN
gm014285_Glyma0 EEAKTDTLLDLNASGDDSAVGCSPVLNLITCLDT-DLPSTSSENQHGSE----PRVFSCN
pt008466_POPTR_ ARQTLQSDLELTTS--DSTQWFNRELNLIDNFRSMDSSETSPETPQGTD--GEQRVFSCN
                 .   :  * * :         .  ****  : : . ..::..  :  :     ******

AT1G80730.1     YCQRKFYSSQALGGHQNAHKRERTLAKRGQYYKMTLSSLPSSAFAFG----HGSVSRFAS
gm014285_Glyma0 YCQRKFYSSQALGGHQNAHRRERSITKRGHHRSGSRGMMASATTAFGIPFLHNHLHHYAT
pt008466_POPTR_ YCQRKFYSSQALGGHQNAHKRERTLAKRGQ--RLIRSQLEASMAAYGHPYFHH--HHHSS
                *******************:***:::***:      . : ::  *:*    *    :.::

AT1G80730.1     MASLPLHGSVNNRSTLGIQAHSTIHKP-------SFLGRQTTSLSHVFKQS-IHQKPTIG
gm014285_Glyma0 MASLPLHGGCSNNKPLGIKAHSIIHKPSSNSSHISFNGFGTTFGHHGWSRPLIDQQPRIG
pt008466_POPTR_ MASLPLHG-----RSLGIQVHSMIHKPSHLS---SSTGFGNVYGHGSWSRPHIDQQPGIG
                ********      .***:.** ****       *  *  ..     :.:. *.*:* **

AT1G80730.1     KMLPEKFHLE----VAGN-------NNSNMVAAKLERIG---------HFKSNQEDHNQF
gm014285_Glyma0 KLTMESCHKT----SRGNVGKFDAVKTTMINSATIEEISGYNMISGVTRFKTNQE---EM
pt008466_POPTR_ KLSMENFYMNATTPSRASVGRFN-----------LERTS-----NG--HLKTNQDD--RI
                *:  *. :        ..                :*. .         ::*:**:   .:

AT1G80730.1     KKIDLTLKL
gm014285_Glyma0 KHLDLSLKL
pt008466_POPTR_ HKLDLSLKL
                :::**:***
BoxShade v3.31 C (beta, 970507) Output
AT1G80730.1     - - - - - - - - - - - - - - M E - - - - - - - - - - - - - - - - - - - - - P S - - I K G D Q E - - M L - - - - K I K K Q
gm014285_Glyma0    M N L P I T R A R G E Y S A M E T L S H E S P F Y D N N L S A E K T P P S P S T P L Q N P Q E K K Q L - - - - S V K E Q
pt008466_POPTR_    - - - - - - - - - - - - - - M E S L V R R - - - - E S S I T A P Q A P P L Q S S - E E N E Q E - - L L D E V N D Q K E E
 
AT1G80730.1     G H Q D L E L G L T L L S R G - - - - T A T S S E L N L I D S F K T - S - S S S T S H H Q H Q Q E Q L A D P R V F S C N
gm014285_Glyma0    E E A K T D T L L D L N A S G D D S A V G C S P V L N L I T C L D T - D L P S T S S E N Q H G S E - - - - P R V F S C N
pt008466_POPTR_    A R Q T L Q S D L E L T T S - - D S T Q W F N R E L N L I D N F R S M D S S E T S P E T P Q G T D - - G E Q R V F S C N
 
AT1G80730.1     Y C Q R K F Y S S Q A L G G H Q N A H K R E R T L A K R G Q Y Y K M T L S S L P S S A F A F G - - - - H G S V S R F A S
gm014285_Glyma0    Y C Q R K F Y S S Q A L G G H Q N A H R R E R S I T K R G H H R S G S R G M M A S A T T A F G I P F L H N H L H H Y A T
pt008466_POPTR_    Y C Q R K F Y S S Q A L G G H Q N A H K R E R T L A K R G Q - - R L I R S Q L E A S M A A Y G H P Y F H H - - H H H S S
 
AT1G80730.1     M A S L P L H G S V N N R S T L G I Q A H S T I H K P - - - - - - - S F L G R Q T T S L S H V F K Q S - I H Q K P T I G
gm014285_Glyma0    M A S L P L H G G C S N N K P L G I K A H S I I H K P S S N S S H I S F N G F G T T F G H H G W S R P L I D Q Q P R I G
pt008466_POPTR_    M A S L P L H G - - - - - R S L G I Q V H S M I H K P S H L S - - - S S T G F G N V Y G H G S W S R P H I D Q Q P G I G
 
AT1G80730.1     K M L P E K F H L E - - - - V A G N - - - - - - - N N S N M V A A K L E R I G - - - - - - - - - H F K S N Q E D H N Q F
gm014285_Glyma0    K L T M E S C H K T - - - - S R G N V G K F D A V K T T M I N S A T I E E I S G Y N M I S G V T R F K T N Q E - - - E M
pt008466_POPTR_    K L S M E N F Y M N A T T P S R A S V G R F N - - - - - - - - - - - L E R T S - - - - - N G - - H L K T N Q D D - - R I
 
AT1G80730.1     K K I D L T L K L
gm014285_Glyma0    K H L D L S L K L
pt008466_POPTR_    H K L D L S L K L
 
0