Input
| Putative repression domain
|
|
AT1G80730.1 |
KQGHQDLELGLTLLSR at 20/228 in AT1G80730.1 |
|
QFKKIDLTLKL at 222/228 in AT1G80730.1 |
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Pt008466 |
DDRIHKLDLSLKL in 245/252 |
AT1G80730.1 |
1st_1st |
0.366822429 |
Ib |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)
AT1G80730.1 ------------------MEPSIKGDQEML----KIKKQGHQDLELGLTLLSRGTAT--S
pt008466_POPTR_ MESLVRRESSITAPQAPPLQSSEENEQELLDEVNDQKEEARQTLQSDLELTTSDSTQWFN
::.* :.:**:* . *::.:* *: .* * : .:: .
AT1G80730.1 SELNLIDSFKTSSSSTSHHQHQQEQLADPRVFSCNYCQRKFYSSQALGGHQNAHKRERTL
pt008466_POPTR_ RELNLIDNFRSMDSSETSPETPQGTDGEQRVFSCNYCQRKFYSSQALGGHQNAHKRERTL
******.*:: .** : : * .: *******************************
AT1G80730.1 AKRGQYYKMTLSSLPSSAFAFGHGSV--SRFASMASLPLHGSVNNRSTLGIQAHSTIHKP
pt008466_POPTR_ AKRGQ--RLIRSQLEASMAAYGHPYFHHHHHSSMASLPLHG-----RSLGIQVHSMIHKP
***** :: *.* :* *:** . :.:********* :****.** ****
AT1G80730.1 SFLGRQTTSLSHVF------KQSIHQKPTIGKMLPEKFHLEVAGNNNSNMVAAKLERI--
pt008466_POPTR_ SHLS-SSTGFGNVYGHGSWSRPHIDQQPGIGKLSMENFYMNATTPSRASVGRFNLERTSN
*.*. .:*.:.:*: : *.*:* ***: *:*:::.: ..:.: :***
AT1G80730.1 GHFKSNQEDHNQFKKIDLTLKL
pt008466_POPTR_ GHLKTNQDD--RIHKLDLSLKL
**:*:**:* :::*:**:***
BoxShade v3.31 C (beta, 970507) Output
AT1G80730.1 |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
M |
E |
P |
S |
I |
K |
G |
D |
Q |
E |
M |
L |
- |
- |
- |
- |
K |
I |
K |
K |
Q |
G |
H |
Q |
D |
L |
E |
L |
G |
L |
T |
L |
L |
S |
R |
G |
T |
A |
T |
- |
- |
S |
pt008466_POPTR_ |
M |
E |
S |
L |
V |
R |
R |
E |
S |
S |
I |
T |
A |
P |
Q |
A |
P |
P |
L |
Q |
S |
S |
E |
E |
N |
E |
Q |
E |
L |
L |
D |
E |
V |
N |
D |
Q |
K |
E |
E |
A |
R |
Q |
T |
L |
Q |
S |
D |
L |
E |
L |
T |
T |
S |
D |
S |
T |
Q |
W |
F |
N |
|
AT1G80730.1 |
S |
E |
L |
N |
L |
I |
D |
S |
F |
K |
T |
S |
S |
S |
S |
T |
S |
H |
H |
Q |
H |
Q |
Q |
E |
Q |
L |
A |
D |
P |
R |
V |
F |
S |
C |
N |
Y |
C |
Q |
R |
K |
F |
Y |
S |
S |
Q |
A |
L |
G |
G |
H |
Q |
N |
A |
H |
K |
R |
E |
R |
T |
L |
pt008466_POPTR_ |
R |
E |
L |
N |
L |
I |
D |
N |
F |
R |
S |
M |
D |
S |
S |
E |
T |
S |
P |
E |
T |
P |
Q |
G |
T |
D |
G |
E |
Q |
R |
V |
F |
S |
C |
N |
Y |
C |
Q |
R |
K |
F |
Y |
S |
S |
Q |
A |
L |
G |
G |
H |
Q |
N |
A |
H |
K |
R |
E |
R |
T |
L |
|
AT1G80730.1 |
A |
K |
R |
G |
Q |
Y |
Y |
K |
M |
T |
L |
S |
S |
L |
P |
S |
S |
A |
F |
A |
F |
G |
H |
G |
S |
V |
- |
- |
S |
R |
F |
A |
S |
M |
A |
S |
L |
P |
L |
H |
G |
S |
V |
N |
N |
R |
S |
T |
L |
G |
I |
Q |
A |
H |
S |
T |
I |
H |
K |
P |
pt008466_POPTR_ |
A |
K |
R |
G |
Q |
- |
- |
R |
L |
I |
R |
S |
Q |
L |
E |
A |
S |
M |
A |
A |
Y |
G |
H |
P |
Y |
F |
H |
H |
H |
H |
H |
S |
S |
M |
A |
S |
L |
P |
L |
H |
G |
- |
- |
- |
- |
- |
R |
S |
L |
G |
I |
Q |
V |
H |
S |
M |
I |
H |
K |
P |
|
AT1G80730.1 |
S |
F |
L |
G |
R |
Q |
T |
T |
S |
L |
S |
H |
V |
F |
- |
- |
- |
- |
- |
- |
K |
Q |
S |
I |
H |
Q |
K |
P |
T |
I |
G |
K |
M |
L |
P |
E |
K |
F |
H |
L |
E |
V |
A |
G |
N |
N |
N |
S |
N |
M |
V |
A |
A |
K |
L |
E |
R |
I |
- |
- |
pt008466_POPTR_ |
S |
H |
L |
S |
- |
S |
S |
T |
G |
F |
G |
N |
V |
Y |
G |
H |
G |
S |
W |
S |
R |
P |
H |
I |
D |
Q |
Q |
P |
G |
I |
G |
K |
L |
S |
M |
E |
N |
F |
Y |
M |
N |
A |
T |
T |
P |
S |
R |
A |
S |
V |
G |
R |
F |
N |
L |
E |
R |
T |
S |
N |
|
AT1G80730.1 |
G |
H |
F |
K |
S |
N |
Q |
E |
D |
H |
N |
Q |
F |
K |
K |
I |
D |
L |
T |
L |
K |
L |
pt008466_POPTR_ |
G |
H |
L |
K |
T |
N |
Q |
D |
D |
- |
- |
R |
I |
H |
K |
L |
D |
L |
S |
L |
K |
L |
|
|