fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G80730.1 KQGHQDLELGLTLLSR at 20/228 in AT1G80730.1
QFKKIDLTLKL at 222/228 in AT1G80730.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt008466 DDRIHKLDLSLKL in 245/252 AT1G80730.1 1st_1st 0.366822429 Ib
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G80730.1     ------------------MEPSIKGDQEML----KIKKQGHQDLELGLTLLSRGTAT--S
pt008466_POPTR_ MESLVRRESSITAPQAPPLQSSEENEQELLDEVNDQKEEARQTLQSDLELTTSDSTQWFN
                                  ::.* :.:**:*    . *::.:* *: .* * : .::   .

AT1G80730.1     SELNLIDSFKTSSSSTSHHQHQQEQLADPRVFSCNYCQRKFYSSQALGGHQNAHKRERTL
pt008466_POPTR_ RELNLIDNFRSMDSSETSPETPQGTDGEQRVFSCNYCQRKFYSSQALGGHQNAHKRERTL
                 ******.*:: .** :  :  *   .: *******************************

AT1G80730.1     AKRGQYYKMTLSSLPSSAFAFGHGSV--SRFASMASLPLHGSVNNRSTLGIQAHSTIHKP
pt008466_POPTR_ AKRGQ--RLIRSQLEASMAAYGHPYFHHHHHSSMASLPLHG-----RSLGIQVHSMIHKP
                *****  ::  *.* :*  *:**  .   :.:*********      :****.** ****

AT1G80730.1     SFLGRQTTSLSHVF------KQSIHQKPTIGKMLPEKFHLEVAGNNNSNMVAAKLERI--
pt008466_POPTR_ SHLS-SSTGFGNVYGHGSWSRPHIDQQPGIGKLSMENFYMNATTPSRASVGRFNLERTSN
                *.*. .:*.:.:*:      :  *.*:* ***:  *:*:::.:  ..:.:   :***   

AT1G80730.1     GHFKSNQEDHNQFKKIDLTLKL
pt008466_POPTR_ GHLKTNQDD--RIHKLDLSLKL
                **:*:**:*  :::*:**:***
BoxShade v3.31 C (beta, 970507) Output
AT1G80730.1     - - - - - - - - - - - - - - - - - - M E P S I K G D Q E M L - - - - K I K K Q G H Q D L E L G L T L L S R G T A T - - S
pt008466_POPTR_    M E S L V R R E S S I T A P Q A P P L Q S S E E N E Q E L L D E V N D Q K E E A R Q T L Q S D L E L T T S D S T Q W F N
 
AT1G80730.1     S E L N L I D S F K T S S S S T S H H Q H Q Q E Q L A D P R V F S C N Y C Q R K F Y S S Q A L G G H Q N A H K R E R T L
pt008466_POPTR_    R E L N L I D N F R S M D S S E T S P E T P Q G T D G E Q R V F S C N Y C Q R K F Y S S Q A L G G H Q N A H K R E R T L
 
AT1G80730.1     A K R G Q Y Y K M T L S S L P S S A F A F G H G S V - - S R F A S M A S L P L H G S V N N R S T L G I Q A H S T I H K P
pt008466_POPTR_    A K R G Q - - R L I R S Q L E A S M A A Y G H P Y F H H H H H S S M A S L P L H G - - - - - R S L G I Q V H S M I H K P
 
AT1G80730.1     S F L G R Q T T S L S H V F - - - - - - K Q S I H Q K P T I G K M L P E K F H L E V A G N N N S N M V A A K L E R I - -
pt008466_POPTR_    S H L S - S S T G F G N V Y G H G S W S R P H I D Q Q P G I G K L S M E N F Y M N A T T P S R A S V G R F N L E R T S N
 
AT1G80730.1     G H F K S N Q E D H N Q F K K I D L T L K L
pt008466_POPTR_    G H L K T N Q D D - - R I H K L D L S L K L
 
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