fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G01060.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt007138 not found in 335aa AT2G01060.1 1st_1st 0.633466135 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G01060.1     ------------------------------MEADNGGPNSSH----ASKQRLRWTHELHE
pt007138_POPTR_ MYQLESVPSSSSVHKNSLVNDQYLDCDDMTMDPINGGNNLNNNPNLASKQRLRWTHELHE
                                              *:. *** * .:    **************

AT2G01060.1     RFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRLAKYLPDSSSEGKKTDKK
pt007138_POPTR_ RFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRLAKYLPDSSSDGKKADKK
                ****************************************************:***:***

AT2G01060.1     ESGDMLSGLDGSSGMQITEALKLQMEVQKRLHEQLEVQRQLQLRIEAQGKYLKKIIEEQQ
pt007138_POPTR_ ETGDMISNLDGSSGMQITEALKLQMEVQKRLHEQLEVQRQLQLRIEAQGKYLKKIIEEQQ
                *:***:*.****************************************************

AT2G01060.1     RLSGVLGE-P----SAPVTGD-------SDPATPAPTSESPLQDKSGKDCGPDKSLSVDE
pt007138_POPTR_ RLSGVLEDVPGSGVTAPVSGDNCPESDKTDPATPAPTSESPLQDKAAKERAPAKSLSIDE
                ****** : *    :***:**       :****************:.*: .* ****:**

AT2G01060.1     SLSSYREPLTPDSGCNIGSPDESTGEERLSKKPRLVRGAAGYTPDIVVGHPILESGLNTS
pt007138_POPTR_ SFSSQPEPLTPDSRCNAGSPAESPRGERSMKKQRVSIGVTYGKQEMVLTHQILESSLNSY
                *:**  ******* ** *** **.  **  ** *:  *.:  . ::*: * ****.**: 

AT2G01060.1     YHQSDHVLAFDQ--PSTSL-LGAEEQLDKVSGDNL
pt007138_POPTR_ PRPHSAFLGREQFDPSSGLSMGIEDQMEKVSGSDV
                 :  . .*. :*  **:.* :* *:*::****.::
BoxShade v3.31 C (beta, 970507) Output
AT2G01060.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M E A D N G G P N S S H - - - - A S K Q R L R W T H E L H E
pt007138_POPTR_    M Y Q L E S V P S S S S V H K N S L V N D Q Y L D C D D M T M D P I N G G N N L N N N P N L A S K Q R L R W T H E L H E
 
AT2G01060.1     R F V D A V A Q L G G P D R A T P K G V L R V M G V Q G L T I Y H V K S H L Q K Y R L A K Y L P D S S S E G K K T D K K
pt007138_POPTR_    R F V D A V A Q L G G P D R A T P K G V L R V M G V Q G L T I Y H V K S H L Q K Y R L A K Y L P D S S S D G K K A D K K
 
AT2G01060.1     E S G D M L S G L D G S S G M Q I T E A L K L Q M E V Q K R L H E Q L E V Q R Q L Q L R I E A Q G K Y L K K I I E E Q Q
pt007138_POPTR_    E T G D M I S N L D G S S G M Q I T E A L K L Q M E V Q K R L H E Q L E V Q R Q L Q L R I E A Q G K Y L K K I I E E Q Q
 
AT2G01060.1     R L S G V L G E - P - - - - S A P V T G D - - - - - - - S D P A T P A P T S E S P L Q D K S G K D C G P D K S L S V D E
pt007138_POPTR_    R L S G V L E D V P G S G V T A P V S G D N C P E S D K T D P A T P A P T S E S P L Q D K A A K E R A P A K S L S I D E
 
AT2G01060.1     S L S S Y R E P L T P D S G C N I G S P D E S T G E E R L S K K P R L V R G A A G Y T P D I V V G H P I L E S G L N T S
pt007138_POPTR_    S F S S Q P E P L T P D S R C N A G S P A E S P R G E R S M K K Q R V S I G V T Y G K Q E M V L T H Q I L E S S L N S Y
 
AT2G01060.1     Y H Q S D H V L A F D Q - - P S T S L - L G A E E Q L D K V S G D N L
pt007138_POPTR_    P R P H S A F L G R E Q F D P S S G L S M G I E D Q M E K V S G S D V
 
0