|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Get sequence file Get alignment file Get formatted file made by BOXSHADE Sequence file prepared (0 sec required). Alignment has started. CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475) AT2G01940.1 MRTDQVMLSNKNT-NTCCVVSSS---------------SSDPFLSSSENGVTT-TNTSTQ pt033952_POPTR_ -------MLDS---ITTSTAPSP---------------SSDPFTSSLDNG-------LTN gm018077_Glyma0 ------MLANN---LSPSSVPT-----------------SEPF-PCTENGT------ATN gm020732_Glyma0 ------MLDNNNCSASNSGAPSS---------------SDAAF-ALSENGV------ANN pt026756_POPTR_ ------MLANS---S-PSSLPS----------------NPEPF-FCLENGN------SNN gm013039_Glyma0 -----MLVVNN---SSPTSEA--------------------------ENGTA----AATN pt022676_POPTR_ ------MLANN---SLSSSLPC----------------NSEPF-SCLENGN------NIN Sb006007_Sorbi1 ------MLG----FCAPAAGPPPDE------------ATPEPF-RSLQIATCTAAAAATT pp021978_Pp1s21 ----------------MNALPSAGGGHGALHLLPEGCNVVSEF-LPLTAGS------VVN . . AT2G01940.1 KRKRRPAGTPDPDAEVVSLSPRTLLESDRYICEICNQGFQRDQNLQMHRRRHKVPWKLLK pt033952_POPTR_ KRKRKPAGTPDPDAEVVSLSPRTLLESDRYVCEICSQGFQRDQNLQMHRRRHKVPWKLLK gm018077_Glyma0 KRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLK gm020732_Glyma0 KRKRRPAGTPDPDAEVVSLSPTTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLK pt026756_POPTR_ KRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLK gm013039_Glyma0 KRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLK pt022676_POPTR_ KRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLK Sb006007_Sorbi1 KKKRRPAGTPDPDAEVVSLSPRTLLESDRYVCEICGQGFQRDQNLQMHRRRHKVPWKLLK pp021978_Pp1s21 KRKRRPAGTPDPGAEVVALSPKTLMESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLK *:**:*******.****:*** **:*****:****.************************ AT2G01940.1 RDNNI--EVKKRVYVCPEPTCLHHNPCHALGDLVGIKKHFRRKHSNHKQWVCERCSKGYA pt033952_POPTR_ RETQE---VKKRVYVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCEKCSKGYA gm018077_Glyma0 RETPV---VRKRVFVCPEPTCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCERCSKGYA gm020732_Glyma0 RETAQGGHQKKRVFVCPEPTCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCDKCSKGYA pt026756_POPTR_ RETPV---VRKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCEKCSKGYA gm013039_Glyma0 RETPV---VKKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCERCSKGYA pt022676_POPTR_ RETPV---VRKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCEKCSKGYA Sb006007_Sorbi1 REAGE--AARKRVFVCPEPSCLHHDPSHALGDLVGIKKHFRRKHSGQRQWACARCSKAYA pp021978_Pp1s21 RPSLG---TLKRVYVCPERSCLHHDPSHALGDLVGIKKHYRRKHCTEKQWKCDKCSKGYA * ***:**** :****:*.************:****. .:** * :***.** AT2G01940.1 VQSDYKAHLKTCGTRGHSCDCGRVFSR-----------------------VESFIEHQDN pt033952_POPTR_ VQSDYKAHLKTCGTRGHSCDCGRVFSR-----------------------VESFIEHQDA gm018077_Glyma0 VQSDYKAHLKTCGTRGHSCDCGRVFSRFFSQFDNGICGRKDGSKCVLEFGVESFIEHQDA gm020732_Glyma0 VQSDYKAHIKTCGTRGHSCDCGRVFSR-----------------------VESFIEHQDA pt026756_POPTR_ VQSDYKAHLKTCGTRGHSCDCGRVFSR-----------------------VESFIEHQDS gm013039_Glyma0 VQSDYKAHLKTCGTRGHSCDCGRVFSR-----------------------VESFIEHQDA pt022676_POPTR_ VQSDYKAHLKTCGTRGHSCDCGRVFSR-----------------------VESFIEHQDA Sb006007_Sorbi1 VHSDYKAHLKTCGTRGHSCDCGRVFSR-----------------------VESFIEHQDT pp021978_Pp1s21 VQSDYKAHLKTCGTRGHCCDCGRVFSR-----------------------VESFIEHQDT *:******:********.********* ********* AT2G01940.1 CSARRVHR-----------------------EPPRPPQT--------------------- pt033952_POPTR_ CTVRRAQP-----------------------ELQA------------------------- gm018077_Glyma0 CNMGRLRP----------------------HESQP------------------------- gm020732_Glyma0 CTVRQHRP-----------------------ELQA------------------------- pt026756_POPTR_ CNMGRLRS-----------------------ESQS------------------------- gm013039_Glyma0 CNVGRLGP-----------------------ETQPQPQTQ-------------------- pt022676_POPTR_ CNMGNLRS-----------------------ESQS------------------------- Sb006007_Sorbi1 CNAGRARA-----------------------DAASPACGAGVA-----------AAASA- pp021978_Pp1s21 CSAVKYKSMHSGDGSERKLSLQRQATDRNSNESPSQSSDTTQAMSFAQSGMSDTAARSAD *. . : AT2G01940.1 ------------------------------------------------------------ pt033952_POPTR_ ------------------------------------------------------------ gm018077_Glyma0 ------------------------------------------------------------ gm020732_Glyma0 ------------------------------------------------------------ pt026756_POPTR_ ------------------------------------------------------------ gm013039_Glyma0 ------------------------------------------------------------ pt022676_POPTR_ ------------------------------------------------------------ Sb006007_Sorbi1 ------------------------------------------------------------ pp021978_Pp1s21 STKVIDHEHSRRIQESQAAYNAVLPGWLLDQRKELELLPWKQRPPESVHPDVLTSGSTMQ AT2G01940.1 ----AVTVP--------------------ACSSRTASTVST-PSSETNYG---------- pt033952_POPTR_ -----LQPA--------------------ACSSRTASSTS--PSSDANF----------- gm018077_Glyma0 -----LQPS--------------------ACLSRTASSPS--PSSETNF----------- gm020732_Glyma0 -----LQP---------------------ACSSRTASSAS--PSSEANF----------- pt026756_POPTR_ -----LQPA--------------------ACLSRTASSPS--PSSDNNF----------- gm013039_Glyma0 --TQAVQAA--------------------ACLSRTA-------SSETNF----------- pt022676_POPTR_ -----LQPA--------------------ACLSRTASSPS--PSSDTNF----------- Sb006007_Sorbi1 GSQQQAPPA--------------------MSLSRTASSTRTSPSSDIAI----------- pp021978_Pp1s21 GDRRVVQPSHGSRSQVTLCSSINSVHPEVSCMGSKAISPSK-CSEDVNAPSLALSIGLFG . . .* *.: AT2G01940.1 ---GTVAVTTPQPLEG-----RPIHQRISSSILT------NSSNNL-------------- pt033952_POPTR_ ------SI-VPLPGI-------PMSKATEPVYFY------S--------DRNDASTSQQE gm018077_Glyma0 ------ST-APWPTR--MIIQKPSETP--TIFMN------NPITAITTAETSSKSNNKLL gm020732_Glyma0 ------SI-AP-PLQGLPVLPKPAEQQQQPA-----------TTTVLLTSEIHGNKSTTS pt026756_POPTR_ ------ST-APWPP---LIISRPTTTSDHAMFF-------SPTTATDVVDKTDSSKSAAH gm013039_Glyma0 ------SNGAPWPQSGTVIIPKPSVTVLEPSSYS------NPTTTA-------------- pt022676_POPTR_ ------ST-APWLP---LII--PRTTPDHAMFFI------TPTTTSSVVDKSDSSKSAAH Sb006007_Sorbi1 ------SP-VAWPGSA-PAIPSPTTAAFHRFEQV------PSPRTP------PSDHRRGG pp021978_Pp1s21 AEVG--SS-TPSP----IVDMKPSFSSVEREVLALTYQQRQGSAGIPKIGTSSRSGAPLG : .. * AT2G01940.1 --NLELQLLPLSSN--------------------------------------QNPNQENQ pt033952_POPTR_ H-NLELQLLPSSS-----------------------------------THFPQNP----- gm018077_Glyma0 HPNLDLQLSTPTNNNNSN-----TSNT--------------------NTSNIANPID-NA gm020732_Glyma0 H-NLELQLLPSST----------------------------------------NS----- pt026756_POPTR_ YQNLELQLSTTSR----------------------------------------NPPE--V gm013039_Glyma0 ------------------------------------------------------------ pt022676_POPTR_ YHNLELQLSTASG----------------------------------------NPLE--I Sb006007_Sorbi1 HHNLELQLMPPSC-----------------------------------GGAPRTP----A pp021978_Pp1s21 N-DLALSMFPTNLVQTRNQVAIDSAATGTDAAVSLSDFLMQAARRLGPSLTHSNAAD-YS AT2G01940.1 QQKVKEPS------HHHNHNH--------------------------------------- pt033952_POPTR_ ------D---------EGYA---------------------------------------- gm018077_Glyma0 AISAKRDH------YHENHS---------------------------------------- gm020732_Glyma0 --QAKRN-------TKENYG---------------------------------------- pt026756_POPTR_ SVSPKRD---------DNHS---------------------------------------- gm013039_Glyma0 ------------------------------------------------------------ pt022676_POPTR_ SVSPKRE---------DNHS---------------------------------------- Sb006007_Sorbi1 AVPPQ-----------SHHA---------------------------------------- pp021978_Pp1s21 ELKAQETSSRTEMVLNYNHGVGSTSSCHEDRAGKAHESDLSGLRPVRRGALQHSQFEPAT AT2G01940.1 --------------------------------DTTNLNLSIAPSSSYQHY---------- pt033952_POPTR_ ----------------------------------TNLKLSIGSSDSLKKN-----EQFKA gm018077_Glyma0 ----------------------------------THLQLSIGSSDMSEKN----DQSNRN gm020732_Glyma0 ------------------------------------LKLSIGSCSNDKGNSSEPPERACS pt026756_POPTR_ ----------------------------------TQLQLSIGSSDVSDRN-----ESNIT gm013039_Glyma0 -------------------------------------------------------ETNI- pt022676_POPTR_ ----------------------------------TQLQLSIGSSDVSDRN-----ESNIS Sb006007_Sorbi1 --------------------------------AAMQLQLSIGVCGGGIGD--DAGERGGE pp021978_Pp1s21 SMVRSRQATIDHTDVTETHEIFTSAHSIDINVSRSQKQMAAAGTRGDQACEQTWTDMSTA AT2G01940.1 ---------------NN---------FDRIKEIMASEQIMKIAMKEKAYAEEAKREAKRQ pt033952_POPTR_ IMDPSGPKRTY----------EPTLEAAKLEEFA-NEQ-LRLAITEKAYAEEARQHAKRQ gm018077_Glyma0 SSEKSSNNSNNINDQNNK-QQSNNMALLRVQEQA-REH-LRIAMAEKAYAEEARKQAKRQ gm020732_Glyma0 EAHRSPPERNNNNNNNN--------------EFA-GEE-LKLAIAEKAYAEEARREAKRQ pt026756_POPTR_ YTNKDHAGKSFPRESNN--SPKPELGASRLKEQA-REQ-LRMAMAEKIYAEEARQQAKRQ gm013039_Glyma0 -----------------------------------IND-LRIAMAEKALAEEARKQAKRQ pt022676_POPTR_ YTDKDH-GKSSPRENNNG-SPRPELGASRLKEQVIREQ-LMMAMAEKIHAEEARQQAKRQ Sb006007_Sorbi1 VVMLAA--------------------AAREKEEEAREQ-LRQAVAEKAAADEARAQAKRH pp021978_Pp1s21 WSDPATARRTKHQTRQESEEAEKELARAEVLKREAREQ-LQLASAEREYADRAREVAKRQ :. : * *: *:.*: ***: AT2G01940.1 REIAENEFANAKKIRQKAQAELERAKFLKEQSMKKISSTI-----MQVT-CQTCKGQFQA pt033952_POPTR_ IEMAELEFANAKRIRQQAQAELEKAQVLREQATKKISSTI-----MQVT-CQACKLQFKL gm018077_Glyma0 IELAEQEFTNAKRIRQQAQVELDKAYALKEHAMKQINSTM-----LQIT-CHFCKQQFQA gm020732_Glyma0 IEIAELEFENAKRIRKQAQAELSRAEELRKQAIKKIGSTV-----MEIA-CHTCKQQFQS pt026756_POPTR_ IELAEQEFANAKRIRQQAQAELGKAQALRQHAIKQINSTI-----LQIT-CHACKQKFHA gm013039_Glyma0 IELAELEFTNAKRIRQQALAELDKAYALKDHAIKHINSTM-----LQIT-CLACKHHFQS pt022676_POPTR_ IELAEQEFANAKRIRQQAQAELDKAQALKQHAIKQINSTI-----LQIT-CHACKQKFHA Sb006007_Sorbi1 AELAEQELASAKRMRRQAQVELSRAHALREHAVRQVNATL-----LQIT-CLGCRHKFRA pp021978_Pp1s21 IELSEADLAKAKRIREHAQAELEKAQFLKERVERSVGASASSQDSSQFSFCHSCKSAIEV *::* :: .**::*.:* .** :* *:.: : :.:: :.: * *: :. AT2G01940.1 VAVP---AATADETSLVVSYMSSANTD----------------------GELE------- pt033952_POPTR_ STAA----ASADETSLAMSYMSSATTEG--------------------DGE--------- gm018077_Glyma0 RNAT---TTSPDDNSLVLSYVSSAITTE--------------------GGEVEN------ gm020732_Glyma0 STVG---VPSSEETSIVMSYMSSATTE----------------------GEAE------- pt026756_POPTR_ R-------ATTDENSLVFSYMSSSITE----------------------GEVEH------ gm013039_Glyma0 --------PTSHDNSFVFSYITQAQSQ--------------------------------- pt022676_POPTR_ R-------TQADENSLVMSYMSSATTE----------------------DEVEH------ Sb006007_Sorbi1 RAPQLMMDAAVAGPEVACSYMSSVVTAE--------------------GGDAEVVDDEPP pp021978_Pp1s21 NASI--RTPTSSPGSSSWSFVTPPTSNCEQLQVGPGKSGISSGQIFMVPGSHEGGAKQAD . . *::: : AT2G01940.1 -------------------------------------------NGF-------------- pt033952_POPTR_ ------------------------------------------------------------ gm018077_Glyma0 ------------------------------------------DN---IAKDHAKD--NN- gm020732_Glyma0 ------------------------------------------------------------ pt026756_POPTR_ ------------------------------------------NNGIGLAKTSNR------ gm013039_Glyma0 -----------------------------------------------LEKHRLKPIINS- pt022676_POPTR_ ------------------------------------------INGIGIAKTFNR------ Sb006007_Sorbi1 P--------------------------------------LDGADAM-LQRRRQQHAMAMD pp021978_Pp1s21 PSCKLLSGRMSWTDTISARLPVSSEEGRKHIWPVGTTSMSTFATSMAVEEASQSE--ENL AT2G01940.1 ------------------ pt033952_POPTR_ ------------------ gm018077_Glyma0 ------------------ gm020732_Glyma0 ------------------ pt026756_POPTR_ ------------------ gm013039_Glyma0 ------------------ pt022676_POPTR_ ------------------ Sb006007_Sorbi1 VVL--------------- pp021978_Pp1s21 VAAAAGSTWRRESIGAWG
|