fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G01940.1 TNSSNNLNLELQLLPL at 269/445 in AT2G01940.1
TNSSNNLNLELQLLPL at 180/356 in AT2G01940.2
TNSSNNLNLELQLLPL at 270/446 in AT2G01940.3
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os012056 not found in 438aa AT2G01940.1 1st_1st 0.414325842 Ia
Gm025128 KLLHPNLDLQLSTPTT in 251/439 AT2G01940.1 1st_1st 0.505617977 Ia
Pt042165 SQQEHNLELQLLPSSS in 250/393 AT2G01940.1 1st_1st 0.485955056 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G01940.1     ---MRTDQVMLSNKNTNTCCVVSSSSSD----PFLSSSENGVTTT---NTSTQKRKRRPA
gm025128_Glyma0 ---------ML-ANNLSPS---SVPTSE----PFPCTENGTA---------TNKRKRRPA
pt042165_POPTR_ ---------MLDSTTTSTA---PSPSSD----PFTTSLDNGV---------TNKRKRKPA
Os012056_Os03t0 MALVKSHHQMLASSSTSS----SSPSSQQQQPPPPASNSSSLAAAAADQPSPAKRKRRPP
                         **  .. ..    . .:*:    *   : ..           . ****:*.

AT2G01940.1     GTPDPDAEVVSLSPRTLLESDRYICEICNQGFQRDQNLQMHRRRHKVPWKLLKRDNNI--
gm025128_Glyma0 GTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETP---
pt042165_POPTR_ GTPDPDAEVVSLSPRTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETQ---
Os012056_Os03t0 GTPDPDAEVVALSPRTLLESDRYVCEICGQGFQREQNLQMHRRRHKVPWRLVKRPAAATA
                **********:***:********:****.*****:**************:*:**      

AT2G01940.1     --------------------EVKKRVYVCPEPTCLHHNPCHALGDLVGIKKHFRRKHSNH
gm025128_Glyma0 --------------------VVRKRVFVCPEPTCLHHDPCHALGDLVGIKKHFRRKHSNH
pt042165_POPTR_ --------------------EVKKRVYVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNH
Os012056_Os03t0 AEDGGAAGGGGGAGGGAGGGGARKRVFVCPEPSCLHHDPAHALGDLVGIKKHFRRKHGGR
                                     .:***:*****:****:*.*****************..:

AT2G01940.1     KQWVCERCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDNCSARRVHREP
gm025128_Glyma0 KQWVCERCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDACNMGRLR---
pt042165_POPTR_ KQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDACTVRGAQ---
Os012056_Os03t0 RQWVCARCAKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDACNSGRVRGE-
                :**** :*:**************************************** *.    :   

AT2G01940.1     PRPPQTAVTVP-ACSSRTASTVSTPSSETNYGGTVAVTTPQP------LEGRPIHQ----
gm025128_Glyma0 ---PESQPLQPSACLSRTASS-PTPWPTR-------MIIPKPSEPPTIFMNNPITAI---
pt042165_POPTR_ ---PELQALQP-ACSSRTASS-TSPSSDANF-----NIAPLPGIP----MSKPTEQVYLC
Os012056_Os03t0 --------VVPVA----TTLPVIRPAALRHH-----HHHPPPPPP---------------
                          * *    *: .   * .            * *                  

AT2G01940.1     --RISSSILTNSSNNL---NLELQL-LPLSSNQNPNQENQQQKVKEPS--H-HHNHNHDT
gm025128_Glyma0 ---TTAETSSKSNNKLLHPNLDLQLSTPTTTNNTSNVANRIDAAISPKRDH-HHHHENHS
pt042165_POPTR_ SDRNDASTSSQQEH-----NLELQL-LPSSSNHLPQ---------NPD--------EPHA
Os012056_Os03t0 ---------------------ELQL-LPASTTAPLAAAFSSNSTTTGSSSHEQHATTMTT
                                     :***  * ::.               .           :

AT2G01940.1     TNLNLSIAPSSSYQHYNNFDRIKEIMAS-----------------EQIMKIAMKEKAYAE
gm025128_Glyma0 THLQLSIGSSDMSE-KNESNRNSSEKSSN------SNINDQNNNNKQSNNMALLRKAYAE
pt042165_POPTR_ ANLKLSIGSTKLKEFTNEQLR-----------------------------LAMTEKAYAE
Os012056_Os03t0 TKLQLSIGPAAVVA-----------AASGGGGACAAAAGGEEEQQREEVRRALEEKTAAD
                ::*:***..:                                         *: .*: *:

AT2G01940.1     EAKREAKRQREIAENEFANAKKIRQKAQAELERAKFLKEQSMKKISSTIMQVTCQTCKGQ
gm025128_Glyma0 EARKQAKRQIELAEQEFTNAKRIRQQAQAELDKAYSLKEHAMKQINSTMLQITCHGCKQQ
pt042165_POPTR_ EARQQAKRQIEMAELEFANAKRIRQQAQSELEKAQLLKEQATKKLSSTIMQVTCQVCKQQ
Os012056_Os03t0 AARERAREEAAAAERALEDARRARHRARGELEKALALRDHAARLIA----QVTCHACRQR
                 *:..*:.:   **  : :*:: *::*:.**::*  *:::: : :     *:**: *: :

AT2G01940.1     FQAVAVPAATADETSLVVSYMSSA-NTDGELENGF--------------
gm025128_Glyma0 FQA-RNAATTPDENSLVLSYVSSAITTEGGGEVSDRC------------
pt042165_POPTR_ FHA-STAAAPADETSLAMSYMSSA-TTEGDGE-----------------
Os012056_Os03t0 SLA----------------VMSMA-AIDGHGASAVAREHLRGGGVGAGI
                  *                 :* *   :*
BoxShade v3.31 C (beta, 970507) Output
AT2G01940.1     - - - M R T D Q V M L S N K N T N T C C V V S S S S S D - - - - P F L S S S E N G V T T T - - - N T S T Q K R K R R P A
gm025128_Glyma0    - - - - - - - - - M L - A N N L S P S - - - S V P T S E - - - - P F P C T E N G T A - - - - - - - - - T N K R K R R P A
pt042165_POPTR_    - - - - - - - - - M L D S T T T S T A - - - P S P S S D - - - - P F T T S L D N G V - - - - - - - - - T N K R K R K P A
Os012056_Os03t0    M A L V K S H H Q M L A S S S T S S - - - - S S P S S Q Q Q Q P P P P A S N S S S L A A A A A D Q P S P A K R K R R P P
 
AT2G01940.1     G T P D P D A E V V S L S P R T L L E S D R Y I C E I C N Q G F Q R D Q N L Q M H R R R H K V P W K L L K R D N N I - -
gm025128_Glyma0    G T P D P D A E V V S L S P K T L L E S D R Y V C E I C N Q G F Q R D Q N L Q M H R R R H K V P W K L L K R E T P - - -
pt042165_POPTR_    G T P D P D A E V V S L S P R T L L E S D R Y V C E I C N Q G F Q R D Q N L Q M H R R R H K V P W K L L K R E T Q - - -
Os012056_Os03t0    G T P D P D A E V V A L S P R T L L E S D R Y V C E I C G Q G F Q R E Q N L Q M H R R R H K V P W R L V K R P A A A T A
 
AT2G01940.1     - - - - - - - - - - - - - - - - - - - - E V K K R V Y V C P E P T C L H H N P C H A L G D L V G I K K H F R R K H S N H
gm025128_Glyma0    - - - - - - - - - - - - - - - - - - - - V V R K R V F V C P E P T C L H H D P C H A L G D L V G I K K H F R R K H S N H
pt042165_POPTR_    - - - - - - - - - - - - - - - - - - - - E V K K R V Y V C P E P S C L H H D P C H A L G D L V G I K K H F R R K H S N H
Os012056_Os03t0    A E D G G A A G G G G G A G G G A G G G G A R K R V F V C P E P S C L H H D P A H A L G D L V G I K K H F R R K H G G R
 
AT2G01940.1     K Q W V C E R C S K G Y A V Q S D Y K A H L K T C G T R G H S C D C G R V F S R V E S F I E H Q D N C S A R R V H R E P
gm025128_Glyma0    K Q W V C E R C S K G Y A V Q S D Y K A H L K T C G T R G H S C D C G R V F S R V E S F I E H Q D A C N M G R L R - - -
pt042165_POPTR_    K Q W V C E K C S K G Y A V Q S D Y K A H L K T C G T R G H S C D C G R V F S R V E S F I E H Q D A C T V R G A Q - - -
Os012056_Os03t0    R Q W V C A R C A K G Y A V Q S D Y K A H L K T C G T R G H S C D C G R V F S R V E S F I E H Q D A C N S G R V R G E -
 
AT2G01940.1     P R P P Q T A V T V P - A C S S R T A S T V S T P S S E T N Y G G T V A V T T P Q P - - - - - - L E G R P I H Q - - - -
gm025128_Glyma0    - - - P E S Q P L Q P S A C L S R T A S S - P T P W P T R - - - - - - - M I I P K P S E P P T I F M N N P I T A I - - -
pt042165_POPTR_    - - - P E L Q A L Q P - A C S S R T A S S - T S P S S D A N F - - - - - N I A P L P G I P - - - - M S K P T E Q V Y L C
Os012056_Os03t0    - - - - - - - - V V P V A - - - - T T L P V I R P A A L R H H - - - - - H H H P P P P P P - - - - - - - - - - - - - - -
 
AT2G01940.1     - - R I S S S I L T N S S N N L - - - N L E L Q L - L P L S S N Q N P N Q E N Q Q Q K V K E P S - - H - H H N H N H D T
gm025128_Glyma0    - - - T T A E T S S K S N N K L L H P N L D L Q L S T P T T T N N T S N V A N R I D A A I S P K R D H - H H H H E N H S
pt042165_POPTR_    S D R N D A S T S S Q Q E H - - - - - N L E L Q L - L P S S S N H L P Q - - - - - - - - - N P D - - - - - - - - E P H A
Os012056_Os03t0    - - - - - - - - - - - - - - - - - - - - - E L Q L - L P A S T T A P L A A A F S S N S T T T G S S S H E Q H A T T M T T
 
AT2G01940.1     T N L N L S I A P S S S Y Q H Y N N F D R I K E I M A S - - - - - - - - - - - - - - - - - E Q I M K I A M K E K A Y A E
gm025128_Glyma0    T H L Q L S I G S S D M S E - K N E S N R N S S E K S S N - - - - - - S N I N D Q N N N N K Q S N N M A L L R K A Y A E
pt042165_POPTR_    A N L K L S I G S T K L K E F T N E Q L R - - - - - - - - - - - - - - - - - - - - - - - - - - - - - L A M T E K A Y A E
Os012056_Os03t0    T K L Q L S I G P A A V V A - - - - - - - - - - - A A S G G G G A C A A A A G G E E E Q Q R E E V R R A L E E K T A A D
 
AT2G01940.1     E A K R E A K R Q R E I A E N E F A N A K K I R Q K A Q A E L E R A K F L K E Q S M K K I S S T I M Q V T C Q T C K G Q
gm025128_Glyma0    E A R K Q A K R Q I E L A E Q E F T N A K R I R Q Q A Q A E L D K A Y S L K E H A M K Q I N S T M L Q I T C H G C K Q Q
pt042165_POPTR_    E A R Q Q A K R Q I E M A E L E F A N A K R I R Q Q A Q S E L E K A Q L L K E Q A T K K L S S T I M Q V T C Q V C K Q Q
Os012056_Os03t0    A A R E R A R E E A A A A E R A L E D A R R A R H R A R G E L E K A L A L R D H A A R L I A - - - - Q V T C H A C R Q R
 
AT2G01940.1     F Q A V A V P A A T A D E T S L V V S Y M S S A - N T D G E L E N G F - - - - - - - - - - - - - -
gm025128_Glyma0    F Q A - R N A A T T P D E N S L V L S Y V S S A I T T E G G G E V S D R C - - - - - - - - - - - -
pt042165_POPTR_    F H A - S T A A A P A D E T S L A M S Y M S S A - T T E G D G E - - - - - - - - - - - - - - - - -
Os012056_Os03t0    S L A - - - - - - - - - - - - - - - - V M S M A - A I D G H G A S A V A R E H L R G G G V G A G I
 
0