fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G01940.1 TNSSNNLNLELQLLPL at 269/445 in AT2G01940.1
TNSSNNLNLELQLLPL at 180/356 in AT2G01940.2
TNSSNNLNLELQLLPL at 270/446 in AT2G01940.3
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt042165 SQQEHNLELQLLPSSS in 250/393 AT2G01940.1 1st_1st 0.485955056 Ia
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G01940.1     MRTDQVMLSNKNTNTCCVVSSSSSDPFLSSSENGVTTTNTSTQKRKRRPAGTPDPDAEVV
pt042165_POPTR_ ------MLDSTTTST---APSPSSDPFTTSLDNGV------TNKRKRKPAGTPDPDAEVV
                      **....*.*   ..*.***** :* :***      *:****:************

AT2G01940.1     SLSPRTLLESDRYICEICNQGFQRDQNLQMHRRRHKVPWKLLKRDNNIEVKKRVYVCPEP
pt042165_POPTR_ SLSPRTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETQ-EVKKRVYVCPEP
                *************:******************************:.: ************

AT2G01940.1     TCLHHNPCHALGDLVGIKKHFRRKHSNHKQWVCERCSKGYAVQSDYKAHLKTCGTRGHSC
pt042165_POPTR_ SCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSC
                :****:****************************:*************************

AT2G01940.1     DCGRVFSRVESFIEHQDNCSARRVHREPPRPPQTAVTVPACSSRTASTVSTPSSETNYGG
pt042165_POPTR_ DCGRVFSRVESFIEHQDACTVRGAQ------PELQALQPACSSRTASSTS-PSSDANF--
                ***************** *:.* .:      *:  .  *********:.* ***::*:  

AT2G01940.1     TVAVTTPQPLEGRPIHQRISSSIL--------TNSSNNLNLELQLLPLSSN---QNPNQE
pt042165_POPTR_ NIA-----PLPGIPMSKPTEQVYLCSDRNDASTSSQQEHNLELQLLPSSSNHLPQNPD--
                .:*     ** * *: :  ..  *        *.*.:: ******** ***   ***:  

AT2G01940.1     NQQQKVKEPSHHHNHNHDTTNLNLSIAPSSSYQHYNNFDRIKEIMASEQIMKIAMKEKAY
pt042165_POPTR_ -------EPH--------AANLKLSIGST----------KLKE-FTNEQ-LRLAMTEKAY
                       **         ::**:***..:          ::** ::.** :::**.****

AT2G01940.1     AEEAKREAKRQREIAENEFANAKKIRQKAQAELERAKFLKEQSMKKISSTIMQVTCQTCK
pt042165_POPTR_ AEEARQQAKRQIEMAELEFANAKRIRQQAQSELEKAQLLKEQATKKLSSTIMQVTCQVCK
                ****:::**** *:** ******:***:**:***:*::****: **:**********.**

AT2G01940.1     GQFQAVAVPAATADETSLVVSYMSSANTDGELENGF
pt042165_POPTR_ QQFHA-STAAAPADETSLAMSYMSSATTEGDGE---
                 **:* :..**.******.:******.*:*: *
BoxShade v3.31 C (beta, 970507) Output
AT2G01940.1     M R T D Q V M L S N K N T N T C C V V S S S S S D P F L S S S E N G V T T T N T S T Q K R K R R P A G T P D P D A E V V
pt042165_POPTR_    - - - - - - M L D S T T T S T - - - A P S P S S D P F T T S L D N G V - - - - - - T N K R K R K P A G T P D P D A E V V
 
AT2G01940.1     S L S P R T L L E S D R Y I C E I C N Q G F Q R D Q N L Q M H R R R H K V P W K L L K R D N N I E V K K R V Y V C P E P
pt042165_POPTR_    S L S P R T L L E S D R Y V C E I C N Q G F Q R D Q N L Q M H R R R H K V P W K L L K R E T Q - E V K K R V Y V C P E P
 
AT2G01940.1     T C L H H N P C H A L G D L V G I K K H F R R K H S N H K Q W V C E R C S K G Y A V Q S D Y K A H L K T C G T R G H S C
pt042165_POPTR_    S C L H H D P C H A L G D L V G I K K H F R R K H S N H K Q W V C E K C S K G Y A V Q S D Y K A H L K T C G T R G H S C
 
AT2G01940.1     D C G R V F S R V E S F I E H Q D N C S A R R V H R E P P R P P Q T A V T V P A C S S R T A S T V S T P S S E T N Y G G
pt042165_POPTR_    D C G R V F S R V E S F I E H Q D A C T V R G A Q - - - - - - P E L Q A L Q P A C S S R T A S S T S - P S S D A N F - -
 
AT2G01940.1     T V A V T T P Q P L E G R P I H Q R I S S S I L - - - - - - - - T N S S N N L N L E L Q L L P L S S N - - - Q N P N Q E
pt042165_POPTR_    N I A - - - - - P L P G I P M S K P T E Q V Y L C S D R N D A S T S S Q Q E H N L E L Q L L P S S S N H L P Q N P D - -
 
AT2G01940.1     N Q Q Q K V K E P S H H H N H N H D T T N L N L S I A P S S S Y Q H Y N N F D R I K E I M A S E Q I M K I A M K E K A Y
pt042165_POPTR_    - - - - - - - E P H - - - - - - - - A A N L K L S I G S T - - - - - - - - - - K L K E - F T N E Q - L R L A M T E K A Y
 
AT2G01940.1     A E E A K R E A K R Q R E I A E N E F A N A K K I R Q K A Q A E L E R A K F L K E Q S M K K I S S T I M Q V T C Q T C K
pt042165_POPTR_    A E E A R Q Q A K R Q I E M A E L E F A N A K R I R Q Q A Q S E L E K A Q L L K E Q A T K K L S S T I M Q V T C Q V C K
 
AT2G01940.1     G Q F Q A V A V P A A T A D E T S L V V S Y M S S A N T D G E L E N G F
pt042165_POPTR_    Q Q F H A - S T A A A P A D E T S L A M S Y M S S A T T E G D G E - - -
 
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