fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G01940.1 TNSSNNLNLELQLLPL at 269/445 in AT2G01940.1
TNSSNNLNLELQLLPL at 180/356 in AT2G01940.2
TNSSNNLNLELQLLPL at 270/446 in AT2G01940.3
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb015948 GGVHHNLELQLMPPRG in 315/536 AT1G68130.1 not_not 0.433988764 III
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G01940.1     MRTDQVMLSNKNTNTCCVVSSSSSDPFLSSSENG-------------VTTTNTSTQKRKR
Sb015948_Sorbi1 ------MLSS------CAPTTAFPPP-----ETGAAPPEPPFRSLQIATTSAAAGAKKKR
                      ***.      *. ::: . *     *.*             .**: ::  *:**

AT2G01940.1     RPAGTPDPDAEVVSLSPRTLLESDRYICEICNQGFQRDQNLQMHRRRHKVPWKLLKRDNN
Sb015948_Sorbi1 RPAGTPDPDAEVVSLSPRTLLESDRYVCEICGQGFQRDQNLQMHRRRHKVPWKLLKREAG
                **************************:****.*************************: .

AT2G01940.1     IEVKKRVYVCPEPTCLHHNPCHALGDLVGIKKHFRRKHSNHKQWVCERCSKGYAVQSDYK
Sb015948_Sorbi1 EAARKRVFVCPEPSCLHHDPSHALGDLVGIKKHFRRKHSGHRQWACARCSKAYAVHSDYK
                  .:***:*****:****:*.******************.*:**.* ****.***:****

AT2G01940.1     AHLKTCGTRGHSCDCGRVFSRVESFIEHQDNCSARRVHREPPRPPQT-------------
Sb015948_Sorbi1 AHLKTCGTRGHTCDCGRVFSRVESFIEHQDTCNAGRPRAETSSSPASGGGGGGGGAGFGM
                ***********:******************.*.* * : *.. .* :             

AT2G01940.1     ----------------AVTVPACSSRTASTVSTPSSETNYG-----------------GT
Sb015948_Sorbi1 AAAGGASTSQQQRQLHAAAAAAALSRTASSAS-PSSGGEFGVSQQQVACWPAGPAIASPT
                                *.:..*. *****:.* ***  ::*                  *

AT2G01940.1     VAVT----------TPQPLEGRP------IHQRISSSILTNSSNNLNLELQLLP---LSS
Sb015948_Sorbi1 AAATFHRFDPALSSPPTPQYERPGGGGGGVHH--------------NLELQLMPPRGSGS
                .*.*          .* *   **      :*:              ******:*    .*

AT2G01940.1     NQNPNQENQQQKVKEPSHHHNHNH-------DTTNLNLSI--------------APSSSY
Sb015948_Sorbi1 YYDAGGTTPAAAVATRCYAFSPHSPAVGLGADPMRLQLSMGFGGGDNDDDSETSAPAATA
                  :..  .    *   .: .. :        *. .*:**:              **::: 

AT2G01940.1     QHYNNFDRIKEIMASEQIMKIAMKEKAYAEEAKREAKRQREIAENEFANAKKIRQKAQAE
Sb015948_Sorbi1 AA-----RLKE-EAREQ-MRLAMAEKAAADDARAQARRQAELAEQELATARRMRQQAQAE
                       *:**  * ** *::** *** *::*: :*:** *:**:*:*.*:::**:****

AT2G01940.1     LERAKFLKEQSMKKISSTIMQVTCQTCKGQFQAVAVPAATADETSLVVSYMSSANTDG--
Sb015948_Sorbi1 LGRAHALRDHAVRQVDATLLQVTCYSCRCKFRARAATGTGGAMSSEVASYVSSVVTEGGD
                * **: *::::::::.:*::**** :*: :*:* *...: .  :* *.**:**. *:*  

AT2G01940.1     -ELENGF----------------------------
Sb015948_Sorbi1 AEVDDDPYRHHHHHRHRQLNADDDAPSHARMMDIN
                 *:::.
BoxShade v3.31 C (beta, 970507) Output
AT2G01940.1     M R T D Q V M L S N K N T N T C C V V S S S S S D P F L S S S E N G - - - - - - - - - - - - - V T T T N T S T Q K R K R
Sb015948_Sorbi1    - - - - - - M L S S - - - - - - C A P T T A F P P P - - - - - E T G A A P P E P P F R S L Q I A T T S A A A G A K K K R
 
AT2G01940.1     R P A G T P D P D A E V V S L S P R T L L E S D R Y I C E I C N Q G F Q R D Q N L Q M H R R R H K V P W K L L K R D N N
Sb015948_Sorbi1    R P A G T P D P D A E V V S L S P R T L L E S D R Y V C E I C G Q G F Q R D Q N L Q M H R R R H K V P W K L L K R E A G
 
AT2G01940.1     I E V K K R V Y V C P E P T C L H H N P C H A L G D L V G I K K H F R R K H S N H K Q W V C E R C S K G Y A V Q S D Y K
Sb015948_Sorbi1    E A A R K R V F V C P E P S C L H H D P S H A L G D L V G I K K H F R R K H S G H R Q W A C A R C S K A Y A V H S D Y K
 
AT2G01940.1     A H L K T C G T R G H S C D C G R V F S R V E S F I E H Q D N C S A R R V H R E P P R P P Q T - - - - - - - - - - - - -
Sb015948_Sorbi1    A H L K T C G T R G H T C D C G R V F S R V E S F I E H Q D T C N A G R P R A E T S S S P A S G G G G G G G G A G F G M
 
AT2G01940.1     - - - - - - - - - - - - - - - - A V T V P A C S S R T A S T V S T P S S E T N Y G - - - - - - - - - - - - - - - - - G T
Sb015948_Sorbi1    A A A G G A S T S Q Q Q R Q L H A A A A A A A L S R T A S S A S - P S S G G E F G V S Q Q Q V A C W P A G P A I A S P T
 
AT2G01940.1     V A V T - - - - - - - - - - T P Q P L E G R P - - - - - - I H Q R I S S S I L T N S S N N L N L E L Q L L P - - - L S S
Sb015948_Sorbi1    A A A T F H R F D P A L S S P P T P Q Y E R P G G G G G G V H H - - - - - - - - - - - - - - N L E L Q L M P P R G S G S
 
AT2G01940.1     N Q N P N Q E N Q Q Q K V K E P S H H H N H N H - - - - - - - D T T N L N L S I - - - - - - - - - - - - - - A P S S S Y
Sb015948_Sorbi1    Y Y D A G G T T P A A A V A T R C Y A F S P H S P A V G L G A D P M R L Q L S M G F G G G D N D D D S E T S A P A A T A
 
AT2G01940.1     Q H Y N N F D R I K E I M A S E Q I M K I A M K E K A Y A E E A K R E A K R Q R E I A E N E F A N A K K I R Q K A Q A E
Sb015948_Sorbi1    A A - - - - - R L K E - E A R E Q - M R L A M A E K A A A D D A R A Q A R R Q A E L A E Q E L A T A R R M R Q Q A Q A E
 
AT2G01940.1     L E R A K F L K E Q S M K K I S S T I M Q V T C Q T C K G Q F Q A V A V P A A T A D E T S L V V S Y M S S A N T D G - -
Sb015948_Sorbi1    L G R A H A L R D H A V R Q V D A T L L Q V T C Y S C R C K F R A R A A T G T G G A M S S E V A S Y V S S V V T E G G D
 
AT2G01940.1     - E L E N G F - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb015948_Sorbi1    A E V D D D P Y R H H H H H R H R Q L N A D D D A P S H A R M M D I N
 
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