fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G01940.1 TNSSNNLNLELQLLPL at 269/445 in AT2G01940.1
TNSSNNLNLELQLLPL at 180/356 in AT2G01940.2
TNSSNNLNLELQLLPL at 270/446 in AT2G01940.3
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb006007 RGGHHNLELQLMPPSC in 289/499 AT1G68130.1 1st_not 0.436797752 II
Sb015948 GGVHHNLELQLMPPRG in 315/536 AT1G68130.1 not_not 0.433988764 III
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G01940.1     MRTDQVMLSNKNTNTCCVVSS--------SSSD-PFLSSSENGVTTTNTSTQKRKRRPAG
Sb006007_Sorbi1 ------MLG-----FCAPAAGPPPDE---ATPE-PFRSLQIATCTAAAAATTKKKRRPAG
Sb015948_Sorbi1 ------MLS-----SCAPTTAFPPPETGAAPPEPPFRSLQIATTSAAAGA--KKKRRPAG
                      **.      *. .:.        :..: ** * .    :::  :  *:******

AT2G01940.1     TPDPDAEVVSLSPRTLLESDRYICEICNQGFQRDQNLQMHRRRHKVPWKLLKRDNNIEVK
Sb006007_Sorbi1 TPDPDAEVVSLSPRTLLESDRYVCEICGQGFQRDQNLQMHRRRHKVPWKLLKREAGEAAR
Sb015948_Sorbi1 TPDPDAEVVSLSPRTLLESDRYVCEICGQGFQRDQNLQMHRRRHKVPWKLLKREAGEAAR
                **********************:****.*************************: .  .:

AT2G01940.1     KRVYVCPEPTCLHHNPCHALGDLVGIKKHFRRKHSNHKQWVCERCSKGYAVQSDYKAHLK
Sb006007_Sorbi1 KRVFVCPEPSCLHHDPSHALGDLVGIKKHFRRKHSGQRQWACARCSKAYAVHSDYKAHLK
Sb015948_Sorbi1 KRVFVCPEPSCLHHDPSHALGDLVGIKKHFRRKHSGHRQWACARCSKAYAVHSDYKAHLK
                ***:*****:****:*.******************.::**.* ****.***:********

AT2G01940.1     TCGTRGHSCDCGRVFSRVESFIEHQDNCSARRVHREPPRPP-------------------
Sb006007_Sorbi1 TCGTRGHSCDCGRVFSRVESFIEHQDTCNAGRARAD-AASPACGAG----------VAAA
Sb015948_Sorbi1 TCGTRGHTCDCGRVFSRVESFIEHQDTCNAGRPRAETSSSPASGGGGGGGGAGFGMAAAG
                *******:******************.*.* * : : . .*                   

AT2G01940.1     ---------QTAVTVPACS-SRTASTVSTPSSETNYGGTVAVTT-------------PQP
Sb006007_Sorbi1 ASAGSQQQ-----APPAMSLSRTASSTRTSP-----SSDIAISP---VAWPGSAPAIPSP
Sb015948_Sorbi1 GASTSQQQRQLHAAAAAAALSRTASSASPSS-----GGEFGVSQQQVACWP-AGPAIASP
                             : .* : *****:. ...     .. ..::              ..*

AT2G01940.1     LEGRPIHQ---RISSSILTNSSN--------NLNLELQLLPLSS--------NQNPNQE-
Sb006007_Sorbi1 TTAA-FHRFE-QVPSPRTPPSDHRRGG----HHNLELQLMPPSCGGA-----PRTPAAV-
Sb015948_Sorbi1 TAAATFHRFDPALSSPPTPQYERPGGGGGGVHHNLELQLMPPRGSGSYYDAGGTTPAAAV
                  .  :*:    :.*.  .  ..        : ******:*             .*    

AT2G01940.1     -NQQQKVKEPSHHHNHNHDTTNLNLSIAP------------SSSYQHYNNFDRIKEIMAS
Sb006007_Sorbi1 -----------PPQSHHAAAMQLQLSIGVCGGGIGDDAGERGGEVVMLAAAAREKEEEAR
Sb015948_Sorbi1 ATRCYAFSPHSPAVGLGADPMRLQLSMGF-GGGDNDDDSETSAPAA--TAAARLK-EEAR
                              .    . .*:**:.             ..         * *   * 

AT2G01940.1     EQIMKIAMKEKAYAEEAKREAKRQREIAENEFANAKKIRQKAQAELERAKFLKEQSMKKI
Sb006007_Sorbi1 EQ-LRQAVAEKAAADEARAQAKRHAELAEQELASAKRMRRQAQVELSRAHALREHAVRQV
Sb015948_Sorbi1 EQ-MRLAMAEKAAADDARAQARRQAELAEQELATARRMRQQAQAELGRAHALRDHAVRQV
                ** :: *: *** *::*: :*:*: *:**:*:*.*:::*::**.** **: *::::::::

AT2G01940.1     SSTIMQVTCQTCKGQFQAVAV-----PAATADETSLVVSYMSSANT----DGE-LENGF-
Sb006007_Sorbi1 NATLLQITCLGCRHKFRARAPQLMMDAAVAGPEVA--CSYMSSVVTAEGGDAEVVDDEPP
Sb015948_Sorbi1 DATLLQVTCYSCRCKFRARAA--TGTGGAMSSEVA---SYVSSVVT-EGGDAE-VDDDPY
                .:*::*:**  *: :*:* *       .. . *.:   **:**. *    *.* :::   

AT2G01940.1     --------------------------------
Sb006007_Sorbi1 PLDGADAMLQRRRQ--------QHAMAMDVVL
Sb015948_Sorbi1 ----RHHHHHRHRQLNADDDAPSHARMMDIN-
BoxShade v3.31 C (beta, 970507) Output
AT2G01940.1     M R T D Q V M L S N K N T N T C C V V S S - - - - - - - - S S S D - P F L S S S E N G V T T T N T S T Q K R K R R P A G
Sb006007_Sorbi1    - - - - - - M L G - - - - - F C A P A A G P P P D E - - - A T P E - P F R S L Q I A T C T A A A A A T T K K K R R P A G
Sb015948_Sorbi1    - - - - - - M L S - - - - - S C A P T T A F P P P E T G A A P P E P P F R S L Q I A T T S A A A G A - - K K K R R P A G
 
AT2G01940.1     T P D P D A E V V S L S P R T L L E S D R Y I C E I C N Q G F Q R D Q N L Q M H R R R H K V P W K L L K R D N N I E V K
Sb006007_Sorbi1    T P D P D A E V V S L S P R T L L E S D R Y V C E I C G Q G F Q R D Q N L Q M H R R R H K V P W K L L K R E A G E A A R
Sb015948_Sorbi1    T P D P D A E V V S L S P R T L L E S D R Y V C E I C G Q G F Q R D Q N L Q M H R R R H K V P W K L L K R E A G E A A R
 
AT2G01940.1     K R V Y V C P E P T C L H H N P C H A L G D L V G I K K H F R R K H S N H K Q W V C E R C S K G Y A V Q S D Y K A H L K
Sb006007_Sorbi1    K R V F V C P E P S C L H H D P S H A L G D L V G I K K H F R R K H S G Q R Q W A C A R C S K A Y A V H S D Y K A H L K
Sb015948_Sorbi1    K R V F V C P E P S C L H H D P S H A L G D L V G I K K H F R R K H S G H R Q W A C A R C S K A Y A V H S D Y K A H L K
 
AT2G01940.1     T C G T R G H S C D C G R V F S R V E S F I E H Q D N C S A R R V H R E P P R P P - - - - - - - - - - - - - - - - - - -
Sb006007_Sorbi1    T C G T R G H S C D C G R V F S R V E S F I E H Q D T C N A G R A R A D - A A S P A C G A G - - - - - - - - - - V A A A
Sb015948_Sorbi1    T C G T R G H T C D C G R V F S R V E S F I E H Q D T C N A G R P R A E T S S S P A S G G G G G G G G A G F G M A A A G
 
AT2G01940.1     - - - - - - - - - Q T A V T V P A C S - S R T A S T V S T P S S E T N Y G G T V A V T T - - - - - - - - - - - - - P Q P
Sb006007_Sorbi1    A S A G S Q Q Q - - - - - A P P A M S L S R T A S S T R T S P - - - - - S S D I A I S P - - - V A W P G S A P A I P S P
Sb015948_Sorbi1    G A S T S Q Q Q R Q L H A A A A A A A L S R T A S S A S P S S - - - - - G G E F G V S Q Q Q V A C W P - A G P A I A S P
 
AT2G01940.1     L E G R P I H Q - - - R I S S S I L T N S S N - - - - - - - - N L N L E L Q L L P L S S - - - - - - - - N Q N P N Q E -
Sb006007_Sorbi1    T T A A - F H R F E - Q V P S P R T P P S D H R R G G - - - - H H N L E L Q L M P P S C G G A - - - - - P R T P A A V -
Sb015948_Sorbi1    T A A A T F H R F D P A L S S P P T P Q Y E R P G G G G G G V H H N L E L Q L M P P R G S G S Y Y D A G G T T P A A A V
 
AT2G01940.1     - N Q Q Q K V K E P S H H H N H N H D T T N L N L S I A P - - - - - - - - - - - - S S S Y Q H Y N N F D R I K E I M A S
Sb006007_Sorbi1    - - - - - - - - - - - P P Q S H H A A A M Q L Q L S I G V C G G G I G D D A G E R G G E V V M L A A A A R E K E E E A R
Sb015948_Sorbi1    A T R C Y A F S P H S P A V G L G A D P M R L Q L S M G F - G G G D N D D D S E T S A P A A - - T A A A R L K - E E A R
 
AT2G01940.1     E Q I M K I A M K E K A Y A E E A K R E A K R Q R E I A E N E F A N A K K I R Q K A Q A E L E R A K F L K E Q S M K K I
Sb006007_Sorbi1    E Q - L R Q A V A E K A A A D E A R A Q A K R H A E L A E Q E L A S A K R M R R Q A Q V E L S R A H A L R E H A V R Q V
Sb015948_Sorbi1    E Q - M R L A M A E K A A A D D A R A Q A R R Q A E L A E Q E L A T A R R M R Q Q A Q A E L G R A H A L R D H A V R Q V
 
AT2G01940.1     S S T I M Q V T C Q T C K G Q F Q A V A V - - - - - P A A T A D E T S L V V S Y M S S A N T - - - - D G E - L E N G F -
Sb006007_Sorbi1    N A T L L Q I T C L G C R H K F R A R A P Q L M M D A A V A G P E V A - - C S Y M S S V V T A E G G D A E V V D D E P P
Sb015948_Sorbi1    D A T L L Q V T C Y S C R C K F R A R A A - - T G T G G A M S S E V A - - - S Y V S S V V T - E G G D A E - V D D D P Y
 
AT2G01940.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb006007_Sorbi1    P L D G A D A M L Q R R R Q - - - - - - - - Q H A M A M D V V L
Sb015948_Sorbi1    - - - - R H H H H H R H R Q L N A D D D A P S H A R M M D I N -
 
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