fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G02540.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm019670 not found in 283aa AT1G14440.2 1st_not 0.421965317 II
Pt020182 not found in 300aa AT1G14440.2 1st_not 0.421965317 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G02540.1     ----MEIASQED--PIPINT--SYGNSGG-GHGNMNHHHHANSAPSSLNITTSNPLLVSS
pt020182_POPTR_ MRKEMELSSHEAGIPIPLNS--TFGGAHGHGHGHLIHHDHPAVPHNHNNIISSTAPQIPS
gm019670_Glyma0 ----MELSSQEGEIPIPINSSTTYGHGNGHGHGLMIHHD-------HNHIISSTAP----
                    **::*:*   ***:*:  ::* . * *** : **.         :* :*..     

AT2G02540.1     NSNG-----LGKNHDHSHHHHVGYNIMVTNIKKEKPVVIKYKECLKNHAATMGGNAIDGC
pt020182_POPTR_ SNNGTSITTASIDDNH------------VPYKK----MVRYRECLKNHAASMGGNATDGC
gm019670_Glyma0 -SNG--IPTMQQEEDHG----------LGSYKK----VVRYRECLKNHAAAMGGNATDGC
                 .**        :.:*               **    :::*:********:***** ***

AT2G02540.1     GEFMPSGEEGSIEALTCSVCNCHRNFHRRETEGEEKTFFSPYLNH----HQPPPQQRKLM
pt020182_POPTR_ GEFMPSGEEGSIEALTCSACNCHRNFHRKEIEGEHTSCTGDHCYHNSPVHFNRLGRKVIL
gm019670_Glyma0 GEFMPSGEEGTIEALNCSACHCHRNFHRKEVEGE-PSCD----YH----HLNINRRRHIL
                **********:****.**.*:*******:* ***  :       *    *     :: ::

AT2G02540.1     FHHKMI-------------------KSPLPQQMIMPIGVTTAGSNSESEDLMEEEGGG--
pt020182_POPTR_ GHHKSILAPEALGYPTATGTLIPSRASAPHHQMIMSYNMGS----LPSESDEQEDGGG--
gm019670_Glyma0 GPHKNLLPPEALGYPTAA-------RSVPPHQMIMPYNIGGIGHHLPSESDEQEDGGGGG
                  ** :                    *   :****. .:        **.  :*:***  

AT2G02540.1     ---SLTFRQPPPPPSPYSYGHNQKKRFRTKFTQEQKEKMISFAERVGWKIQRQEESVVQQ
pt020182_POPTR_ ---VLMAR----P------AQLMKKRFRTKFSQEQKEKMLNFAEKVGWKLQKQEETVVQQ
gm019670_Glyma0 GMVQLSSR----PIS--SQQQLVKKRFRTKFSQEQKDKMLNFAEKVGWKIQKQEESVVQQ
                    *  *    *       :  ********:****:**:.***:****:*:***:****

AT2G02540.1     LCQEIGIRRRVLKVWMHNNKQNLSKKSNNVSNNVDLSAGNNDITENLASTNP
pt020182_POPTR_ FCQEIGVKRRVLKVWMHNNKHSLAKKNPSTTT---------------TTSNS
gm019670_Glyma0 FCQEIGVKRRVLKVWMHNNKHNLAKKNPPTTA---------------APPPP
                :*****::************:.*:**.  .:                :.. .
BoxShade v3.31 C (beta, 970507) Output
AT2G02540.1     - - - - M E I A S Q E D - - P I P I N T - - S Y G N S G G - G H G N M N H H H H A N S A P S S L N I T T S N P L L V S S
pt020182_POPTR_    M R K E M E L S S H E A G I P I P L N S - - T F G G A H G H G H G H L I H H D H P A V P H N H N N I I S S T A P Q I P S
gm019670_Glyma0    - - - - M E L S S Q E G E I P I P I N S S T T Y G H G N G H G H G L M I H H D - - - - - - - H N H I I S S T A P - - - -
 
AT2G02540.1     N S N G - - - - - L G K N H D H S H H H H V G Y N I M V T N I K K E K P V V I K Y K E C L K N H A A T M G G N A I D G C
pt020182_POPTR_    S N N G T S I T T A S I D D N H - - - - - - - - - - - - V P Y K K - - - - M V R Y R E C L K N H A A S M G G N A T D G C
gm019670_Glyma0    - S N G - - I P T M Q Q E E D H G - - - - - - - - - - L G S Y K K - - - - V V R Y R E C L K N H A A A M G G N A T D G C
 
AT2G02540.1     G E F M P S G E E G S I E A L T C S V C N C H R N F H R R E T E G E E K T F F S P Y L N H - - - - H Q P P P Q Q R K L M
pt020182_POPTR_    G E F M P S G E E G S I E A L T C S A C N C H R N F H R K E I E G E H T S C T G D H C Y H N S P V H F N R L G R K V I L
gm019670_Glyma0    G E F M P S G E E G T I E A L N C S A C H C H R N F H R K E V E G E - P S C D - - - - Y H - - - - H L N I N R R R H I L
 
AT2G02540.1     F H H K M I - - - - - - - - - - - - - - - - - - - K S P L P Q Q M I M P I G V T T A G S N S E S E D L M E E E G G G - -
pt020182_POPTR_    G H H K S I L A P E A L G Y P T A T G T L I P S R A S A P H H Q M I M S Y N M G S - - - - L P S E S D E Q E D G G G - -
gm019670_Glyma0    G P H K N L L P P E A L G Y P T A A - - - - - - - R S V P P H Q M I M P Y N I G G I G H H L P S E S D E Q E D G G G G G
 
AT2G02540.1     - - - S L T F R Q P P P P P S P Y S Y G H N Q K K R F R T K F T Q E Q K E K M I S F A E R V G W K I Q R Q E E S V V Q Q
pt020182_POPTR_    - - - V L M A R - - - - P - - - - - - A Q L M K K R F R T K F S Q E Q K E K M L N F A E K V G W K L Q K Q E E T V V Q Q
gm019670_Glyma0    G M V Q L S S R - - - - P I S - - S Q Q Q L V K K R F R T K F S Q E Q K D K M L N F A E K V G W K I Q K Q E E S V V Q Q
 
AT2G02540.1     L C Q E I G I R R R V L K V W M H N N K Q N L S K K S N N V S N N V D L S A G N N D I T E N L A S T N P
pt020182_POPTR_    F C Q E I G V K R R V L K V W M H N N K H S L A K K N P S T T T - - - - - - - - - - - - - - - T T S N S
gm019670_Glyma0    F C Q E I G V K R R V L K V W M H N N K H N L A K K N P P T T A - - - - - - - - - - - - - - - A P P P P
 
0