fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G02540.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt020182 not found in 300aa AT1G14440.2 1st_not 0.421965317 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G02540.1     ----MEIASQED--PIPINTSYGNS-GGGHGNMNHHHHANSAPSSLNITTSNPLLVSSNS
pt020182_POPTR_ MRKEMELSSHEAGIPIPLNSTFGGAHGHGHGHLIHHDHPAVPHNHNNIISSTAPQIPSSN
                    **::*:*   ***:*:::*.: * ***:: **.*.  . .  ** :*..  :.*..

AT2G02540.1     NGLGKNHDHSHHHHVGYNIMVTNIKKEKPVVIKYKECLKNHAATMGGNAIDGCGEFMPSG
pt020182_POPTR_ NGTSITTASIDDNHVPYKKMV-----------RYRECLKNHAASMGGNATDGCGEFMPSG
                ** . .    ..:** *: **           :*:********:***** **********

AT2G02540.1     EEGSIEALTCSVCNCHRNFHRRETEGEEKTFFSPYLNHHQPPPQQR----KLMFHHKMIK
pt020182_POPTR_ EEGSIEALTCSACNCHRNFHRKEIEGEHTSCTGDHCYHNSPVHFNRLGRKVILGHHKSIL
                ***********.*********:* ***..:  . :  *:.*   :*     :: *** * 

AT2G02540.1     SP------------LP-------QQMIMPIGVTTAGSNSESEDLMEEEGGGSLTFRQPPP
pt020182_POPTR_ APEALGYPTATGTLIPSRASAPHHQMIMSYNMGSLPSESDE----QEDGGGVLMAR----
                :*            :*       :****. .: :  *:*:.    :*:*** *  *    

AT2G02540.1     PPSPYSYGHNQKKRFRTKFTQEQKEKMISFAERVGWKIQRQEESVVQQLCQEIGIRRRVL
pt020182_POPTR_ -PAQL-----MKKRFRTKFSQEQKEKMLNFAEKVGWKLQKQEETVVQQFCQEIGVKRRVL
                 *:        ********:*******:.***:****:*:***:****:*****::****

AT2G02540.1     KVWMHNNKQNLSKKSNNVSNNVDLSAGNNDITENLASTNP
pt020182_POPTR_ KVWMHNNKHSLAKKNPSTTTTTSNS---------------
                ********:.*:**. ..:.... *
BoxShade v3.31 C (beta, 970507) Output
AT2G02540.1     - - - - M E I A S Q E D - - P I P I N T S Y G N S - G G G H G N M N H H H H A N S A P S S L N I T T S N P L L V S S N S
pt020182_POPTR_    M R K E M E L S S H E A G I P I P L N S T F G G A H G H G H G H L I H H D H P A V P H N H N N I I S S T A P Q I P S S N
 
AT2G02540.1     N G L G K N H D H S H H H H V G Y N I M V T N I K K E K P V V I K Y K E C L K N H A A T M G G N A I D G C G E F M P S G
pt020182_POPTR_    N G T S I T T A S I D D N H V P Y K K M V - - - - - - - - - - - R Y R E C L K N H A A S M G G N A T D G C G E F M P S G
 
AT2G02540.1     E E G S I E A L T C S V C N C H R N F H R R E T E G E E K T F F S P Y L N H H Q P P P Q Q R - - - - K L M F H H K M I K
pt020182_POPTR_    E E G S I E A L T C S A C N C H R N F H R K E I E G E H T S C T G D H C Y H N S P V H F N R L G R K V I L G H H K S I L
 
AT2G02540.1     S P - - - - - - - - - - - - L P - - - - - - - Q Q M I M P I G V T T A G S N S E S E D L M E E E G G G S L T F R Q P P P
pt020182_POPTR_    A P E A L G Y P T A T G T L I P S R A S A P H H Q M I M S Y N M G S L P S E S D E - - - - Q E D G G G V L M A R - - - -
 
AT2G02540.1     P P S P Y S Y G H N Q K K R F R T K F T Q E Q K E K M I S F A E R V G W K I Q R Q E E S V V Q Q L C Q E I G I R R R V L
pt020182_POPTR_    - P A Q L - - - - - M K K R F R T K F S Q E Q K E K M L N F A E K V G W K L Q K Q E E T V V Q Q F C Q E I G V K R R V L
 
AT2G02540.1     K V W M H N N K Q N L S K K S N N V S N N V D L S A G N N D I T E N L A S T N P
pt020182_POPTR_    K V W M H N N K H S L A K K N P S T T T T T S N S - - - - - - - - - - - - - - -
 
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