fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G02540.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm019670 not found in 283aa AT1G14440.2 1st_not 0.421965317 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G02540.1     MEIASQED--PIPIN--TSYGNSGG-GHGNMNHHHH----ANSAPSSLNITTSNPLLVSS
gm019670_Glyma0 MELSSQEGEIPIPINSSTTYGHGNGHGHGLMIHHDHNHIISSTAPSN-----GIPTMQQE
                **::***.  *****  *:**:..* *** * **.*    :.:***.     . * : ..

AT2G02540.1     NSNGLGKNHDHSHHHHVGYNIMVTNIKKEKPVVIKYKECLKNHAATMGGNAIDGCGEFMP
gm019670_Glyma0 EDHGLG------------------SYKK----VVRYRECLKNHAAAMGGNATDGCGEFMP
                :.:***                  . **    *::*:********:***** ********

AT2G02540.1     SGEEGSIEALTCSVCNCHRNFHRRETEGEEKTFFSPYLNHHQPPPQQRKLMFHHKMIKSP
gm019670_Glyma0 SGEEGTIEALNCSACHCHRNFHRKEVEGEPSCDY-----HHLNINRRRHILGPHKNLLPP
                *****:****.**.*:*******:*.*** .  :     **    ::*:::  ** : .*

AT2G02540.1     L------------PQQMIMPIGVTTAGSNSESEDLMEEEGGGSLTFRQPPPPPSPYSYGH
gm019670_Glyma0 EALGYPTAARSVPPHQMIMPYNIGGIGHHLPSESDEQEDGGGGGGMVQLSSRPIS-SQQQ
                             *:***** .:   * :  **.  :*:***.  : * .. * . *  :

AT2G02540.1     NQKKRFRTKFTQEQKEKMISFAERVGWKIQRQEESVVQQLCQEIGIRRRVLKVWMHNNKQ
gm019670_Glyma0 LVKKRFRTKFSQEQKDKMLNFAEKVGWKIQKQEESVVQQFCQEIGVKRRVLKVWMHNNKH
                  ********:****:**:.***:******:********:*****::************:

AT2G02540.1     NLSKKSNNVSNNVDLSAGNNDITENLASTNP-
gm019670_Glyma0 NLAKKNPPTT----------------AAPPPP
                **:**.  .:                *:. *
BoxShade v3.31 C (beta, 970507) Output
AT2G02540.1     M E I A S Q E D - - P I P I N - - T S Y G N S G G - G H G N M N H H H H - - - - A N S A P S S L N I T T S N P L L V S S
gm019670_Glyma0    M E L S S Q E G E I P I P I N S S T T Y G H G N G H G H G L M I H H D H N H I I S S T A P S N - - - - - G I P T M Q Q E
 
AT2G02540.1     N S N G L G K N H D H S H H H H V G Y N I M V T N I K K E K P V V I K Y K E C L K N H A A T M G G N A I D G C G E F M P
gm019670_Glyma0    E D H G L G - - - - - - - - - - - - - - - - - - S Y K K - - - - V V R Y R E C L K N H A A A M G G N A T D G C G E F M P
 
AT2G02540.1     S G E E G S I E A L T C S V C N C H R N F H R R E T E G E E K T F F S P Y L N H H Q P P P Q Q R K L M F H H K M I K S P
gm019670_Glyma0    S G E E G T I E A L N C S A C H C H R N F H R K E V E G E P S C D Y - - - - - H H L N I N R R R H I L G P H K N L L P P
 
AT2G02540.1     L - - - - - - - - - - - - P Q Q M I M P I G V T T A G S N S E S E D L M E E E G G G S L T F R Q P P P P P S P Y S Y G H
gm019670_Glyma0    E A L G Y P T A A R S V P P H Q M I M P Y N I G G I G H H L P S E S D E Q E D G G G G G G M V Q L S S R P I S - S Q Q Q
 
AT2G02540.1     N Q K K R F R T K F T Q E Q K E K M I S F A E R V G W K I Q R Q E E S V V Q Q L C Q E I G I R R R V L K V W M H N N K Q
gm019670_Glyma0    L V K K R F R T K F S Q E Q K D K M L N F A E K V G W K I Q K Q E E S V V Q Q F C Q E I G V K R R V L K V W M H N N K H
 
AT2G02540.1     N L S K K S N N V S N N V D L S A G N N D I T E N L A S T N P -
gm019670_Glyma0    N L A K K N P P T T - - - - - - - - - - - - - - - - A A P P P P
 
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