fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G03710.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt041129 not found in 242aa AT5G15800.1 1st_not 0.529652351 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G03710.1     MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEIALLIFSNRGKLYEFCSS
pt041129_POPTR_ MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNSGKLFEFCSS
                ****:*************************************:**:**** ***:*****

AT2G03710.1     PSGMARTVDKYRKHSYATMDPNQSAKDL-QDKYQDYLKLKSRVEILQHSQRHLLGEELSE
pt041129_POPTR_ -SNMATTIEKYQRFSYGALEGGQSEKETQQNNYQEYLKLKTRVDVLQRSQRNLLGEDLGN
                 *.** *::**::.**.::: .** *:  *::**:*****:**::**:***:****:*.:

AT2G03710.1     MDVNELEHLERQVDASLRQIRSTKARSMLDQLSDLKTKEEMLLETNRDLRRKLEDSDAAL
pt041129_POPTR_ LGTMELDQLENQLDSSLKQIRSRKGQFVLDELSELQRKEELLLETNNALKRKLEETSAAI
                :.. **::**.*:*:**:**** *.: :**:**:*: ***:*****. *:****::.**:

AT2G03710.1     TQSFWGSSAAEQQQQHQQQQQGMSSYQSNPPIQEAGFFKPLQGNVALQMSSHYNHNPANA
pt041129_POPTR_ RLS-W--KVGEQRVPY--------SFQ---PVQPYDPIEPLQYNSTFQ----FGYNPAE-
                  * *  ...**:  :        *:*   *:*  . ::*** * ::*    :.:***: 

AT2G03710.1     TNSAT---TSQNVNGFFPGWMV
pt041129_POPTR_ TDQATVTSSSQNVNGFIPGWML
                *:.**   :*******:****:
BoxShade v3.31 C (beta, 970507) Output
AT2G03710.1     M G R G K V E L K R I E N K I N R Q V T F A K R R N G L L K K A Y E L S V L C D A E I A L L I F S N R G K L Y E F C S S
pt041129_POPTR_    M G R G R V E L K R I E N K I N R Q V T F A K R R N G L L K K A Y E L S V L C D A E V A L I I F S N S G K L F E F C S S
 
AT2G03710.1     P S G M A R T V D K Y R K H S Y A T M D P N Q S A K D L - Q D K Y Q D Y L K L K S R V E I L Q H S Q R H L L G E E L S E
pt041129_POPTR_    - S N M A T T I E K Y Q R F S Y G A L E G G Q S E K E T Q Q N N Y Q E Y L K L K T R V D V L Q R S Q R N L L G E D L G N
 
AT2G03710.1     M D V N E L E H L E R Q V D A S L R Q I R S T K A R S M L D Q L S D L K T K E E M L L E T N R D L R R K L E D S D A A L
pt041129_POPTR_    L G T M E L D Q L E N Q L D S S L K Q I R S R K G Q F V L D E L S E L Q R K E E L L L E T N N A L K R K L E E T S A A I
 
AT2G03710.1     T Q S F W G S S A A E Q Q Q Q H Q Q Q Q Q G M S S Y Q S N P P I Q E A G F F K P L Q G N V A L Q M S S H Y N H N P A N A
pt041129_POPTR_    R L S - W - - K V G E Q R V P Y - - - - - - - - S F Q - - - P V Q P Y D P I E P L Q Y N S T F Q - - - - F G Y N P A E -
 
AT2G03710.1     T N S A T - - - T S Q N V N G F F P G W M V
pt041129_POPTR_    T D Q A T V T S S S Q N V N G F I P G W M L
 
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