fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G03710.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt041129 not found in 242aa AT5G15800.1 1st_not 0.529652351 II
Pt018991 not found in 245aa AT3G02310.1 not_not 0.507157464 III
Pt018990 not found in 245aa AT3G02310.1 not_not 0.507157464 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (1 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G03710.1     MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEIALLIFSNRGKLYEFCSS
pt041129_POPTR_ MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNSGKLFEFCSS
pt018990_POPTR_ MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST
pt018991_POPTR_ MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCST
                ****:*************************************:**:**** ***:****:

AT2G03710.1     PSGMARTVDKYRKHSYATMDPNQSAKDL-QDKYQDYLKLKSRVEILQHSQRHLLGEELSE
pt041129_POPTR_ -SNMATTIEKYQRFSYGALEGGQSEKETQQNNYQEYLKLKTRVDVLQRSQRNLLGEDLGN
pt018990_POPTR_ -SNMLKTLERYQKCSYGAEEVNKPAKEL-ESSYREYLKVKARFEALQRTQRNLLGEDLGP
pt018991_POPTR_ -SNMLKTLERYQKCSYGAEEVNKPAKEL-ESSYREYLKVKARFEALQRTQRNLLGEDLGP
                 *.*  *:::*:: **.: : .:. *:  :..*::***:*:*.: **::**:****:*. 

AT2G03710.1     MDVNELEHLERQVDASLRQIRSTKARSMLDQLSDLKTKEEMLLETNRDLRRKLEDSDA--
pt041129_POPTR_ LGTMELDQLENQLDSSLKQIRSRKGQFVLDELSELQRKEELLLETNNALKRKLEETSA--
pt018990_POPTR_ LNTKELEQLERQLESSLNQVRSTKTQYMLDQLADLQNKEHLLLEANRGLTIKLDEISARN
pt018991_POPTR_ LNTKELEQLERQLESSLNQVRSTKTQYMLDQLADLQNKEHLLLEANRGLTIKLDEISARN
                :.. **::**.*:::**.*:** * : :**:*::*: **.:***:*. *  **:: .*  

AT2G03710.1     ALTQSFWGSSAAEQQ-QQHQQQQQGMSSYQSNPPIQEAGFFKPLQGNVALQMSSHYNHNP
pt041129_POPTR_ AIRLS-W--KVGEQR-VPYSFQ-----------PVQPYDPIEPLQYNSTFQ----FGYNP
pt018990_POPTR_ SLRPS-W--EGDDQQNMSYGHQ-----------HAQSQGLFQALECNPTLQ----IGYNP
pt018991_POPTR_ SLRPS-W--EGDDQQNMSYGHQ-----------HAQSQGLFQALECNPTLQ----IGYNP
                ::  * *  .  :*:   :  *             *  . ::.*: * ::*     .:**

AT2G03710.1     ANATNSATTS---QNVNGFFPGWMV
pt041129_POPTR_ AETDQATVTS-SSQNVNGFIPGWML
pt018990_POPTR_ VGSDQMTATTHATQQVHGFIPGWML
pt018991_POPTR_ VGSDQMTATTHATQQVHGFIPGWML
                . : : :.*:   *:*:**:****:
BoxShade v3.31 C (beta, 970507) Output
AT2G03710.1     M G R G K V E L K R I E N K I N R Q V T F A K R R N G L L K K A Y E L S V L C D A E I A L L I F S N R G K L Y E F C S S
pt041129_POPTR_    M G R G R V E L K R I E N K I N R Q V T F A K R R N G L L K K A Y E L S V L C D A E V A L I I F S N S G K L F E F C S S
pt018990_POPTR_    M G R G R V E L K R I E N K I N R Q V T F A K R R N G L L K K A Y E L S V L C D A E V A L I I F S N R G K L Y E F C S T
pt018991_POPTR_    M G R G R V E L K R I E N K I N R Q V T F A K R R N G L L K K A Y E L S V L C D A E V A L I I F S N R G K L Y E F C S T
 
AT2G03710.1     P S G M A R T V D K Y R K H S Y A T M D P N Q S A K D L - Q D K Y Q D Y L K L K S R V E I L Q H S Q R H L L G E E L S E
pt041129_POPTR_    - S N M A T T I E K Y Q R F S Y G A L E G G Q S E K E T Q Q N N Y Q E Y L K L K T R V D V L Q R S Q R N L L G E D L G N
pt018990_POPTR_    - S N M L K T L E R Y Q K C S Y G A E E V N K P A K E L - E S S Y R E Y L K V K A R F E A L Q R T Q R N L L G E D L G P
pt018991_POPTR_    - S N M L K T L E R Y Q K C S Y G A E E V N K P A K E L - E S S Y R E Y L K V K A R F E A L Q R T Q R N L L G E D L G P
 
AT2G03710.1     M D V N E L E H L E R Q V D A S L R Q I R S T K A R S M L D Q L S D L K T K E E M L L E T N R D L R R K L E D S D A - -
pt041129_POPTR_    L G T M E L D Q L E N Q L D S S L K Q I R S R K G Q F V L D E L S E L Q R K E E L L L E T N N A L K R K L E E T S A - -
pt018990_POPTR_    L N T K E L E Q L E R Q L E S S L N Q V R S T K T Q Y M L D Q L A D L Q N K E H L L L E A N R G L T I K L D E I S A R N
pt018991_POPTR_    L N T K E L E Q L E R Q L E S S L N Q V R S T K T Q Y M L D Q L A D L Q N K E H L L L E A N R G L T I K L D E I S A R N
 
AT2G03710.1     A L T Q S F W G S S A A E Q Q - Q Q H Q Q Q Q Q G M S S Y Q S N P P I Q E A G F F K P L Q G N V A L Q M S S H Y N H N P
pt041129_POPTR_    A I R L S - W - - K V G E Q R - V P Y S F Q - - - - - - - - - - - P V Q P Y D P I E P L Q Y N S T F Q - - - - F G Y N P
pt018990_POPTR_    S L R P S - W - - E G D D Q Q N M S Y G H Q - - - - - - - - - - - H A Q S Q G L F Q A L E C N P T L Q - - - - I G Y N P
pt018991_POPTR_    S L R P S - W - - E G D D Q Q N M S Y G H Q - - - - - - - - - - - H A Q S Q G L F Q A L E C N P T L Q - - - - I G Y N P
 
AT2G03710.1     A N A T N S A T T S - - - Q N V N G F F P G W M V
pt041129_POPTR_    A E T D Q A T V T S - S S Q N V N G F I P G W M L
pt018990_POPTR_    V G S D Q M T A T T H A T Q Q V H G F I P G W M L
pt018991_POPTR_    V G S D Q M T A T T H A T Q Q V H G F I P G W M L
 
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