fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G03710.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb023523 WGVCGSLSLSLCVCVC in 32/401 AT1G24260.1 1st_not 0.458077709 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G03710.1     ------MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEIALLIFSNRGKL
Sb023523_Sorbi1 LEGLGAMGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKL
                      ****:*************************************:**:********

AT2G03710.1     YEFCSSPSGMARTVDKYRKHSYATMDP---NQSAKDLQDKYQDYLKLKSRVEILQHSQRH
Sb023523_Sorbi1 YEFCSGQS-ITKTLERYEKSNYGGPDTAVQNKENELVQSSRNEYLKLKARVDNLQRTQRN
                *****. * :::*:::*.* .*.  *.   *:. : :*.. ::*****:**: **::**:

AT2G03710.1     LLGEELSEMDVNELEHLERQVDASLRQIRSTKARSMLDQLSDLKTKEEMLLETNRDLRRK
Sb023523_Sorbi1 LLGEDLGSLGIKELEQLEKQLDSSLRHIRSTRTQHMLDQLTDLQRREQMLCEANKCLRRK
                ****:*..:.::***:**:*:*:***:****::: *****:**: :*:** *:*: ****

AT2G03710.1     LEDSDAALTQSFWGSSAAEQQQQHQQQQQGMSSYQSNPPIQEAG-------FFKPLQGNV
Sb023523_Sorbi1 LEETSNQVHGQVWEHGA------------NLLGYERHSPPQQAPSHVGNGLFFHPLEAAA
                **::.  :  ..*  .*            .: .*: :.* *:*        **:**:. .

AT2G03710.1     --ALQMSSHYNHNPANATNSATTSQNVNGFFPGWMV
Sb023523_Sorbi1 EPTLQIGFAPEH--------------MNNFMPTWLP
                  :**:.   :*              :*.*:* *:
BoxShade v3.31 C (beta, 970507) Output
AT2G03710.1     - - - - - - M G R G K V E L K R I E N K I N R Q V T F A K R R N G L L K K A Y E L S V L C D A E I A L L I F S N R G K L
Sb023523_Sorbi1    L E G L G A M G R G R V E L K R I E N K I N R Q V T F A K R R N G L L K K A Y E L S V L C D A E V A L I I F S N R G K L
 
AT2G03710.1     Y E F C S S P S G M A R T V D K Y R K H S Y A T M D P - - - N Q S A K D L Q D K Y Q D Y L K L K S R V E I L Q H S Q R H
Sb023523_Sorbi1    Y E F C S G Q S - I T K T L E R Y E K S N Y G G P D T A V Q N K E N E L V Q S S R N E Y L K L K A R V D N L Q R T Q R N
 
AT2G03710.1     L L G E E L S E M D V N E L E H L E R Q V D A S L R Q I R S T K A R S M L D Q L S D L K T K E E M L L E T N R D L R R K
Sb023523_Sorbi1    L L G E D L G S L G I K E L E Q L E K Q L D S S L R H I R S T R T Q H M L D Q L T D L Q R R E Q M L C E A N K C L R R K
 
AT2G03710.1     L E D S D A A L T Q S F W G S S A A E Q Q Q Q H Q Q Q Q Q G M S S Y Q S N P P I Q E A G - - - - - - - F F K P L Q G N V
Sb023523_Sorbi1    L E E T S N Q V H G Q V W E H G A - - - - - - - - - - - - N L L G Y E R H S P P Q Q A P S H V G N G L F F H P L E A A A
 
AT2G03710.1     - - A L Q M S S H Y N H N P A N A T N S A T T S Q N V N G F F P G W M V
Sb023523_Sorbi1    E P T L Q I G F A P E H - - - - - - - - - - - - - - M N N F M P T W L P
 
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