fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G04038.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm035172 not found in 214aa AT3G30530.1 1st_not 0.489510489 II
Pt041671 not found in 200aa AT1G13600.1 1st_not 0.489510489 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G04038.1     MIPAEINGYFQYLSPE----------YNVINMPSSPTSSLNYLNDLIINNNNYSSSS---
pt041671_POPTR_ MLPGE-LTGIHYIAPDQSL-IPFPANFGMMQQSSIPAFHFNRL------LNNLQSSSFPQ
gm035172_Glyma1 MQTKEVVSSLSYLLPSNPCSYPPSNNYTSMIQNSIPTFQFQRFSNQIYGCNNSHNTTYQV
                * . *    : *: *.          :  :   * *:  :: :       **  .::   

AT2G04038.1     -----NSQDLMISNNSTSDEDHHQSIMVLDERKQRRMLSNRESARRSRMRKQRHLDELWS
pt041671_POPTR_ PVREFTPQSSSLSNNSTSDESEEHQLSIIDERKQRRMISNRESARRSRMRKQKHLDELWT
gm035172_Glyma1 P--DFSPQSSCISSNSTSDEADDQNLSLINERKHRRMLSNRESARRSRMRKQKHLDELWS
                     ..*.  :*.****** ..:.: :::***:***:**************:******:

AT2G04038.1     QVIRLRNENNCLIDKLNRVSETQNCVLKENSKLKEEASDLRQLVCELKSNKN----N---
pt041671_POPTR_ QVVRLRTENHNLIDKLNHVSECHDRVLQENARLKKEASDLRQMITDLQIGSP-------Y
gm035172_Glyma1 QVVWLRNENHQLIDKLNHVSETHDQVLQENSQLKEEASELRQMIRDMQIHSPCGGPNSFI
                **: **.**: ******:*** :: **:**::**:***:***:: :::  .         

AT2G04038.1     -------------NNSFPREFEDN--------------
pt041671_POPTR_ TATALRDLEEVPCNTAHVRA-ESSNQ--SVTSSVDLLH
gm035172_Glyma1 TPLEDHDVDHVP--SAYLRSDDSSNQFNSCNNNMDLLG
                              .:. *  :..
BoxShade v3.31 C (beta, 970507) Output
AT2G04038.1     M I P A E I N G Y F Q Y L S P E - - - - - - - - - - Y N V I N M P S S P T S S L N Y L N D L I I N N N N Y S S S S - - -
pt041671_POPTR_    M L P G E - L T G I H Y I A P D Q S L - I P F P A N F G M M Q Q S S I P A F H F N R L - - - - - - L N N L Q S S S F P Q
gm035172_Glyma1    M Q T K E V V S S L S Y L L P S N P C S Y P P S N N Y T S M I Q N S I P T F Q F Q R F S N Q I Y G C N N S H N T T Y Q V
 
AT2G04038.1     - - - - - N S Q D L M I S N N S T S D E D H H Q S I M V L D E R K Q R R M L S N R E S A R R S R M R K Q R H L D E L W S
pt041671_POPTR_    P V R E F T P Q S S S L S N N S T S D E S E E H Q L S I I D E R K Q R R M I S N R E S A R R S R M R K Q K H L D E L W T
gm035172_Glyma1    P - - D F S P Q S S C I S S N S T S D E A D D Q N L S L I N E R K H R R M L S N R E S A R R S R M R K Q K H L D E L W S
 
AT2G04038.1     Q V I R L R N E N N C L I D K L N R V S E T Q N C V L K E N S K L K E E A S D L R Q L V C E L K S N K N - - - - N - - -
pt041671_POPTR_    Q V V R L R T E N H N L I D K L N H V S E C H D R V L Q E N A R L K K E A S D L R Q M I T D L Q I G S P - - - - - - - Y
gm035172_Glyma1    Q V V W L R N E N H Q L I D K L N H V S E T H D Q V L Q E N S Q L K E E A S E L R Q M I R D M Q I H S P C G G P N S F I
 
AT2G04038.1     - - - - - - - - - - - - - N N S F P R E F E D N - - - - - - - - - - - - - -
pt041671_POPTR_    T A T A L R D L E E V P C N T A H V R A - E S S N Q - - S V T S S V D L L H
gm035172_Glyma1    T P L E D H D V D H V P - - S A Y L R S D D S S N Q F N S C N N N M D L L G
 
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