fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G04038.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt041671 not found in 200aa AT1G13600.1 1st_not 0.489510489 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G04038.1     MIPAEINGYFQYLSPEYNVINMPSS----PTSSLN--YLNDLIINNNNYSSSS-------
pt041671_POPTR_ MLPGELTG-IHYIAPDQSLIPFPANFGMMQQSSIPAFHFNRLL---NNLQSSSFPQPVRE
                *:*.*:.* ::*::*: .:* :*:.      **:   ::* *:   ** .***       

AT2G04038.1     -NSQDLMISNNSTSDEDHHQSIMVLDERKQRRMLSNRESARRSRMRKQRHLDELWSQVIR
pt041671_POPTR_ FTPQSSSLSNNSTSDESEEHQLSIIDERKQRRMISNRESARRSRMRKQKHLDELWTQVVR
                 ..*.  :********...:.: ::********:**************:******:**:*

AT2G04038.1     LRNENNCLIDKLNRVSETQNCVLKENSKLKEEASDLRQLVCELKSNKNNNNSFPREFEDN
pt041671_POPTR_ LRTENHNLIDKLNHVSECHDRVLQENARLKKEASDLRQMITDLQIGSPYTATALRDLEEV
                **.**: ******:*** :: **:**::**:*******:: :*: ..  . :  *::*: 

AT2G04038.1     ------------------------
pt041671_POPTR_ PCNTAHVRAESSNQSVTSSVDLLH
BoxShade v3.31 C (beta, 970507) Output
AT2G04038.1     M I P A E I N G Y F Q Y L S P E Y N V I N M P S S - - - - P T S S L N - - Y L N D L I I N N N N Y S S S S - - - - - - -
pt041671_POPTR_    M L P G E L T G - I H Y I A P D Q S L I P F P A N F G M M Q Q S S I P A F H F N R L L - - - N N L Q S S S F P Q P V R E
 
AT2G04038.1     - N S Q D L M I S N N S T S D E D H H Q S I M V L D E R K Q R R M L S N R E S A R R S R M R K Q R H L D E L W S Q V I R
pt041671_POPTR_    F T P Q S S S L S N N S T S D E S E E H Q L S I I D E R K Q R R M I S N R E S A R R S R M R K Q K H L D E L W T Q V V R
 
AT2G04038.1     L R N E N N C L I D K L N R V S E T Q N C V L K E N S K L K E E A S D L R Q L V C E L K S N K N N N N S F P R E F E D N
pt041671_POPTR_    L R T E N H N L I D K L N H V S E C H D R V L Q E N A R L K K E A S D L R Q M I T D L Q I G S P Y T A T A L R D L E E V
 
AT2G04038.1     - - - - - - - - - - - - - - - - - - - - - - - -
pt041671_POPTR_    P C N T A H V R A E S S N Q S V T S S V D L L H
 
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