fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G04038.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt033625 not found in 200aa AT1G13600.1 not_not 0.479020979 III
Pt019238 not found in 196aa AT3G30530.1 not_not 0.440559440 III
Pt003451 not found in 193aa AT3G30530.1 not_not 0.433566433 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G04038.1     MIPAEINGYFQYLSPEYNVIN-------MPSSPTSSLNYLNDLIINNNNYSSSSNSQDLM
pt033625_POPTR_ MLPGELTG-IRYLTADQNLVPFPANFGMMQQSNIPSFHF-NRLLSNLQNSSLPQPVYEFA
pt019238_POPTR_ MQPNEIAG-LHYLVP-PNSSPYSAHFS-MTQDNSQMFQF-NQFTNQSYNFQIPPQLQEFS
pt003451_POPTR_ MQPSEVTG-LHYLVP-SSPSPYSANFS-MSQNDSQMF----QFTNPSYNSQIPSQVQEFS
                * * *: * ::** .  .          * ..    :     :     * . .    :: 

AT2G04038.1     -----ISNNSTSDEDHHQSIMVLDERKQRRMLSNRESARRSRMRKQRHLDELWSQVIRLR
pt033625_POPTR_ PQSSSLSNNSTSDESEEHQLSIIDERKQRRMISNRESARRSRMRKQKHLDELWSQVVRLR
pt019238_POPTR_ LQASCMSSHSTSDEADEQQLSLINERKQRRMISNRESARRSRMRKQKHLDELWSQVVWLR
pt003451_POPTR_ LQASCMSSISTSDEADEQQLSLINERKQRRMVSNRESARRSRMRKQKHLDELWSQVVWFR
                     :*. ***** ..:.: :::*******:**************:*********: :*

AT2G04038.1     NENNCLIDKLNRVSETQNCVLKENSKLKEEASDLRQLVCELKSNKNNNNSFPREFEDN--
pt033625_POPTR_ TENHNLIDKLSHVSECHDRVLQENARLKQEASDFRQMLTDFQIGSPYTTTALRDLEEVPC
pt019238_POPTR_ NENHQLVDKVNHVSECHDQVVQENNQLKEEISELRQVLTDMQLSSPYPS--LKGLEDITC
pt003451_POPTR_ NENHQLLDKLNHVSECHDRVVHENAQLKEETSGLRQILTDMQLNSPYPL--LKDLEDITC
                .**: *:**:.:*** :: *::** :**:* * :**:: ::: ..       : :*:   

AT2G04038.1     ----------------------
pt033625_POPTR_ NTAHLRAESSNQSITSSVDLLH
pt019238_POPTR_ DTAYLRAESSNQSITSSSDLLG
pt003451_POPTR_ DTAYLGSESSNQSITSSSDLLG
BoxShade v3.31 C (beta, 970507) Output
AT2G04038.1     M I P A E I N G Y F Q Y L S P E Y N V I N - - - - - - - M P S S P T S S L N Y L N D L I I N N N N Y S S S S N S Q D L M
pt033625_POPTR_    M L P G E L T G - I R Y L T A D Q N L V P F P A N F G M M Q Q S N I P S F H F - N R L L S N L Q N S S L P Q P V Y E F A
pt019238_POPTR_    M Q P N E I A G - L H Y L V P - P N S S P Y S A H F S - M T Q D N S Q M F Q F - N Q F T N Q S Y N F Q I P P Q L Q E F S
pt003451_POPTR_    M Q P S E V T G - L H Y L V P - S S P S P Y S A N F S - M S Q N D S Q M F - - - - Q F T N P S Y N S Q I P S Q V Q E F S
 
AT2G04038.1     - - - - - I S N N S T S D E D H H Q S I M V L D E R K Q R R M L S N R E S A R R S R M R K Q R H L D E L W S Q V I R L R
pt033625_POPTR_    P Q S S S L S N N S T S D E S E E H Q L S I I D E R K Q R R M I S N R E S A R R S R M R K Q K H L D E L W S Q V V R L R
pt019238_POPTR_    L Q A S C M S S H S T S D E A D E Q Q L S L I N E R K Q R R M I S N R E S A R R S R M R K Q K H L D E L W S Q V V W L R
pt003451_POPTR_    L Q A S C M S S I S T S D E A D E Q Q L S L I N E R K Q R R M V S N R E S A R R S R M R K Q K H L D E L W S Q V V W F R
 
AT2G04038.1     N E N N C L I D K L N R V S E T Q N C V L K E N S K L K E E A S D L R Q L V C E L K S N K N N N N S F P R E F E D N - -
pt033625_POPTR_    T E N H N L I D K L S H V S E C H D R V L Q E N A R L K Q E A S D F R Q M L T D F Q I G S P Y T T T A L R D L E E V P C
pt019238_POPTR_    N E N H Q L V D K V N H V S E C H D Q V V Q E N N Q L K E E I S E L R Q V L T D M Q L S S P Y P S - - L K G L E D I T C
pt003451_POPTR_    N E N H Q L L D K L N H V S E C H D R V V H E N A Q L K E E T S G L R Q I L T D M Q L N S P Y P L - - L K D L E D I T C
 
AT2G04038.1     - - - - - - - - - - - - - - - - - - - - - -
pt033625_POPTR_    N T A H L R A E S S N Q S I T S S V D L L H
pt019238_POPTR_    D T A Y L R A E S S N Q S I T S S S D L L G
pt003451_POPTR_    D T A Y L G S E S S N Q S I T S S S D L L G
 
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