fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G04038.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt041671 not found in 200aa AT1G13600.1 1st_not 0.489510489 II
Pt033625 not found in 200aa AT1G13600.1 not_not 0.479020979 III
Pt019238 not found in 196aa AT3G30530.1 not_not 0.440559440 III
Pt003451 not found in 193aa AT3G30530.1 not_not 0.433566433 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G04038.1     MIPAEINGYFQYLSPEYN------VINMPSSPTSSLNYLNDLIINNNNYSSSSNSQDLM-
pt003451_POPTR_ MQPSEVTG-LHYLVPSSP-SPYSANFSMSQNDS-QMF---QFTNPSYNSQIPSQVQEFSL
pt041671_POPTR_ MLPGELTG-IHYIAPDQSLIPFPANFGMMQQSSIPAFHFNRLLNNLQSSSFPQPVREFTP
pt019238_POPTR_ MQPNEIAG-LHYLVPPNS-SPYSAHFSMTQDNS-QMFQFNQFTNQSYNFQIPPQLQEFSL
pt033625_POPTR_ MLPGELTG-IRYLTADQNLVPFPANFGMMQQSNIPSFHFNRLLSNLQNSSLPQPVYEFAP
                * * *: * ::*: .          :.* .. .        :     . . .    ::  

AT2G04038.1     ----ISNNSTSDEDHHQSIMVLDERKQRRMLSNRESARRSRMRKQRHLDELWSQVIRLRN
pt003451_POPTR_ QASCMSSISTSDEADEQQLSLINERKQRRMVSNRESARRSRMRKQKHLDELWSQVVWFRN
pt041671_POPTR_ QSSSLSNNSTSDESEEHQLSIIDERKQRRMISNRESARRSRMRKQKHLDELWTQVVRLRT
pt019238_POPTR_ QASCMSSHSTSDEADEQQLSLINERKQRRMISNRESARRSRMRKQKHLDELWSQVVWLRN
pt033625_POPTR_ QSSSLSNNSTSDESEEHQLSIIDERKQRRMISNRESARRSRMRKQKHLDELWSQVVRLRT
                    :*. ***** ..:.: :::*******:**************:******:**: :*.

AT2G04038.1     ENNCLIDKLNRVSETQNCVLKENSKLKEEASDLRQLVCELKSNKNNNNSFPREFEDN---
pt003451_POPTR_ ENHQLLDKLNHVSECHDRVVHENAQLKEETSGLRQILTDMQLNSPYPL--LKDLEDITCD
pt041671_POPTR_ ENHNLIDKLNHVSECHDRVLQENARLKKEASDLRQMITDLQIGSPYTATALRDLEEVPCN
pt019238_POPTR_ ENHQLVDKVNHVSECHDQVVQENNQLKEEISELRQVLTDMQLSSPYPS--LKGLEDITCD
pt033625_POPTR_ ENHNLIDKLSHVSECHDRVLQENARLKQEASDFRQMLTDFQIGSPYTTTALRDLEEVPCN
                **: *:**:.:*** :: *::** :**:* * :**:: ::: ..       : :*:    

AT2G04038.1     ---------------------
pt003451_POPTR_ TAYLGSESSNQSITSSSDLLG
pt041671_POPTR_ TAHVRAESSNQSVTSSVDLLH
pt019238_POPTR_ TAYLRAESSNQSITSSSDLLG
pt033625_POPTR_ TAHLRAESSNQSITSSVDLLH
BoxShade v3.31 C (beta, 970507) Output
AT2G04038.1     M I P A E I N G Y F Q Y L S P E Y N - - - - - - V I N M P S S P T S S L N Y L N D L I I N N N N Y S S S S N S Q D L M -
pt003451_POPTR_    M Q P S E V T G - L H Y L V P S S P - S P Y S A N F S M S Q N D S - Q M F - - - Q F T N P S Y N S Q I P S Q V Q E F S L
pt041671_POPTR_    M L P G E L T G - I H Y I A P D Q S L I P F P A N F G M M Q Q S S I P A F H F N R L L N N L Q S S S F P Q P V R E F T P
pt019238_POPTR_    M Q P N E I A G - L H Y L V P P N S - S P Y S A H F S M T Q D N S - Q M F Q F N Q F T N Q S Y N F Q I P P Q L Q E F S L
pt033625_POPTR_    M L P G E L T G - I R Y L T A D Q N L V P F P A N F G M M Q Q S N I P S F H F N R L L S N L Q N S S L P Q P V Y E F A P
 
AT2G04038.1     - - - - I S N N S T S D E D H H Q S I M V L D E R K Q R R M L S N R E S A R R S R M R K Q R H L D E L W S Q V I R L R N
pt003451_POPTR_    Q A S C M S S I S T S D E A D E Q Q L S L I N E R K Q R R M V S N R E S A R R S R M R K Q K H L D E L W S Q V V W F R N
pt041671_POPTR_    Q S S S L S N N S T S D E S E E H Q L S I I D E R K Q R R M I S N R E S A R R S R M R K Q K H L D E L W T Q V V R L R T
pt019238_POPTR_    Q A S C M S S H S T S D E A D E Q Q L S L I N E R K Q R R M I S N R E S A R R S R M R K Q K H L D E L W S Q V V W L R N
pt033625_POPTR_    Q S S S L S N N S T S D E S E E H Q L S I I D E R K Q R R M I S N R E S A R R S R M R K Q K H L D E L W S Q V V R L R T
 
AT2G04038.1     E N N C L I D K L N R V S E T Q N C V L K E N S K L K E E A S D L R Q L V C E L K S N K N N N N S F P R E F E D N - - -
pt003451_POPTR_    E N H Q L L D K L N H V S E C H D R V V H E N A Q L K E E T S G L R Q I L T D M Q L N S P Y P L - - L K D L E D I T C D
pt041671_POPTR_    E N H N L I D K L N H V S E C H D R V L Q E N A R L K K E A S D L R Q M I T D L Q I G S P Y T A T A L R D L E E V P C N
pt019238_POPTR_    E N H Q L V D K V N H V S E C H D Q V V Q E N N Q L K E E I S E L R Q V L T D M Q L S S P Y P S - - L K G L E D I T C D
pt033625_POPTR_    E N H N L I D K L S H V S E C H D R V L Q E N A R L K Q E A S D F R Q M L T D F Q I G S P Y T T T A L R D L E E V P C N
 
AT2G04038.1     - - - - - - - - - - - - - - - - - - - - -
pt003451_POPTR_    T A Y L G S E S S N Q S I T S S S D L L G
pt041671_POPTR_    T A H V R A E S S N Q S V T S S V D L L H
pt019238_POPTR_    T A Y L R A E S S N Q S I T S S S D L L G
pt033625_POPTR_    T A H L R A E S S N Q S I T S S V D L L H
 
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