fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G04038.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm003838 not found in 151aa AT3G30530.1 not_not 0.479020979 III
Gm051143 not found in 220aa AT3G30530.1 not_not 0.465034965 III
Gm050542 not found in 195aa AT3G30530.1 not_not 0.461538461 III
Gm022507 not found in 193aa AT3G30530.1 not_not 0.458041958 III
Gm000832 not found in 198aa AT3G30530.1 not_not 0.458041958 III
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Sequence file prepared (1 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G04038.1     MIPAE-INGYFQYLSPE---------YNVINMPSS---PTSSLNYLNDLIINNNNYSSSS
gm051143_Glyma1 MQSREVVSG-LNYLLPSNPCPYPPNNNNYTTMFQNNINPTFQFQRFSNQIYGYNNINNTP
gm022507_Glyma0 MQARE-ITG-LNYLLPPDPC------FNY-SMVQNTI-PTFQLHKLSNQFYG---LQKPP
gm003838_Glyma0 MVPS--------------------------------------------------------
gm050542_Glyma1 MQARE-ITG-LNYLLPSDPCPYP---GHY-SMVQNTI-PTFQLHKLSNQFYG---LQN-P
gm000832_Glyma0 MVPSE-IRG-VHYLAPENPFLVPP---NF-SLLQSDI-PNLHLNTL---------LSNFP
                * .                                                         

AT2G04038.1     N------------SQDLMISNNSTSDEDHHQSIMVLDERKQRRMLSNRESARRSRMRKQR
gm051143_Glyma1 ----YHKVPDLFSPQSSCISSNSTSDEADEQNLSLINERKHRRMISNRESARRSRMRKQK
gm022507_Glyma0 ----PQVLADFSPPQSSCISSNSTSDEADEQQQSLINERKHRRMISNRESARRSRMRKQK
gm003838_Glyma0 --------HEFVVPPSSCLSNNSTSDEADEIQFNIIDERKHRRMISNRESARRSRMRKQK
gm050542_Glyma1 ----PKVLADFSPPQSSCISSNSTSDEADEQQQSLINERKHRRMISNRESARRSRMRKQK
gm000832_Glyma0 NCHFPPSGHEFVVPPSSCLSSNSTSDEADEIQFNIIDERKHRRMISNRESARRSRMRKQK
                             . .  :*.****** .. .  :::***:***:**************:

AT2G04038.1     HLDELWSQVIRLRNENNCLIDKLNRVSETQNCVLKENSKLKEEASDLRQLVCE-------
gm051143_Glyma1 HLDELWSQVVWLRNENHQLMDKLNHVSESHDQVMQENAQLKEQALELRQMIRDMQIHSPC
gm022507_Glyma0 HLDELWSQVVWLRNENHQLMDKLNHVSESHDKVAQENVQLREEASELRQMICDMQLHSPY
gm003838_Glyma0 HLDELWSQVVRLRTENHSLIDKLNHVSESHDRVLQENARLKEEASDLRQMLADMQIGTSF
gm050542_Glyma1 HLDELWSQVVWLRNENHQLMDKLNHVSASQDKVVQENVQLREEASELRQMICDMQLHSPY
gm000832_Glyma0 HLDELWSQVVRLRTENHNLIDKLNHVSESHDRVLQENARLKEEASALRQMLADMQIGTAF
                *********: **.**: *:****:** ::: * :** :*:*:*  ***:: :       

AT2G04038.1     -----------------------LKSNKN--NNNSFPREFEDN---
gm051143_Glyma1 PSSFITPLEDHHHDVDHVIPSAYLRSDSSNQLSNSCNNNMDDLLG-
gm022507_Glyma0 HPPPLSPIDD---DV-----SPYVKSDSS--ITDSL-----DLLG-
gm003838_Glyma0 ACT-MEDLEDLPCNT-----SQLLKPDP---LNESITPA--DMIHE
gm050542_Glyma1 HPPPLSPIDD---DV-----SPYVKSDSS--ITDSL-----DLLG-
gm000832_Glyma0 ACT-MEDLEDLPCNT-----SQ-LKPDP---LNQSITPA--DMIHE
                                       ::.:     .:*      *
BoxShade v3.31 C (beta, 970507) Output
AT2G04038.1     M I P A E - I N G Y F Q Y L S P E - - - - - - - - - Y N V I N M P S S - - - P T S S L N Y L N D L I I N N N N Y S S S S
gm051143_Glyma1    M Q S R E V V S G - L N Y L L P S N P C P Y P P N N N N Y T T M F Q N N I N P T F Q F Q R F S N Q I Y G Y N N I N N T P
gm022507_Glyma0    M Q A R E - I T G - L N Y L L P P D P C - - - - - - F N Y - S M V Q N T I - P T F Q L H K L S N Q F Y G - - - L Q K P P
gm003838_Glyma0    M V P S - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm050542_Glyma1    M Q A R E - I T G - L N Y L L P S D P C P Y P - - - G H Y - S M V Q N T I - P T F Q L H K L S N Q F Y G - - - L Q N - P
gm000832_Glyma0    M V P S E - I R G - V H Y L A P E N P F L V P P - - - N F - S L L Q S D I - P N L H L N T L - - - - - - - - - L S N F P
 
AT2G04038.1     N - - - - - - - - - - - - S Q D L M I S N N S T S D E D H H Q S I M V L D E R K Q R R M L S N R E S A R R S R M R K Q R
gm051143_Glyma1    - - - - Y H K V P D L F S P Q S S C I S S N S T S D E A D E Q N L S L I N E R K H R R M I S N R E S A R R S R M R K Q K
gm022507_Glyma0    - - - - P Q V L A D F S P P Q S S C I S S N S T S D E A D E Q Q Q S L I N E R K H R R M I S N R E S A R R S R M R K Q K
gm003838_Glyma0    - - - - - - - - H E F V V P P S S C L S N N S T S D E A D E I Q F N I I D E R K H R R M I S N R E S A R R S R M R K Q K
gm050542_Glyma1    - - - - P K V L A D F S P P Q S S C I S S N S T S D E A D E Q Q Q S L I N E R K H R R M I S N R E S A R R S R M R K Q K
gm000832_Glyma0    N C H F P P S G H E F V V P P S S C L S S N S T S D E A D E I Q F N I I D E R K H R R M I S N R E S A R R S R M R K Q K
 
AT2G04038.1     H L D E L W S Q V I R L R N E N N C L I D K L N R V S E T Q N C V L K E N S K L K E E A S D L R Q L V C E - - - - - - -
gm051143_Glyma1    H L D E L W S Q V V W L R N E N H Q L M D K L N H V S E S H D Q V M Q E N A Q L K E Q A L E L R Q M I R D M Q I H S P C
gm022507_Glyma0    H L D E L W S Q V V W L R N E N H Q L M D K L N H V S E S H D K V A Q E N V Q L R E E A S E L R Q M I C D M Q L H S P Y
gm003838_Glyma0    H L D E L W S Q V V R L R T E N H S L I D K L N H V S E S H D R V L Q E N A R L K E E A S D L R Q M L A D M Q I G T S F
gm050542_Glyma1    H L D E L W S Q V V W L R N E N H Q L M D K L N H V S A S Q D K V V Q E N V Q L R E E A S E L R Q M I C D M Q L H S P Y
gm000832_Glyma0    H L D E L W S Q V V R L R T E N H N L I D K L N H V S E S H D R V L Q E N A R L K E E A S A L R Q M L A D M Q I G T A F
 
AT2G04038.1     - - - - - - - - - - - - - - - - - - - - - - - L K S N K N - - N N N S F P R E F E D N - - -
gm051143_Glyma1    P S S F I T P L E D H H H D V D H V I P S A Y L R S D S S N Q L S N S C N N N M D D L L G -
gm022507_Glyma0    H P P P L S P I D D - - - D V - - - - - S P Y V K S D S S - - I T D S L - - - - - D L L G -
gm003838_Glyma0    A C T - M E D L E D L P C N T - - - - - S Q L L K P D P - - - L N E S I T P A - - D M I H E
gm050542_Glyma1    H P P P L S P I D D - - - D V - - - - - S P Y V K S D S S - - I T D S L - - - - - D L L G -
gm000832_Glyma0    A C T - M E D L E D L P C N T - - - - - S Q - L K P D P - - - L N Q S I T P A - - D M I H E
 
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