fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G04038.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm035172 not found in 214aa AT3G30530.1 1st_not 0.489510489 II
Gm003838 not found in 151aa AT3G30530.1 not_not 0.479020979 III
Gm051143 not found in 220aa AT3G30530.1 not_not 0.465034965 III
Gm050542 not found in 195aa AT3G30530.1 not_not 0.461538461 III
Gm022507 not found in 193aa AT3G30530.1 not_not 0.458041958 III
Gm000832 not found in 198aa AT3G30530.1 not_not 0.458041958 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G04038.1     MIPAE-INGYFQYLSP-----------EY-NVINMPSSPTSSLNYLNDLIINNNN-----
gm051143_Glyma1 MQSREVVSG-LNYLLPSNPCPYPPNNNNYTTMFQNNINPTFQFQRFSNQIYGYNNINNTP
gm022507_Glyma0 MQARE-ITG-LNYLLPPDPC---F---NY-SMVQNTI-PTFQLHKLSNQFYGLQK---PP
gm050542_Glyma1 MQARE-ITG-LNYLLPSDPCPYPG---HY-SMVQNTI-PTFQLHKLSNQFYGLQN----P
gm035172_Glyma1 MQTKEVVSS-LSYLLPSNPCSYPP-SNNYTSMIQNSI-PTFQFQRFSNQIYGCNNSHNTT
gm000832_Glyma0 MVPSE-IRG-VHYLAPENPFLVPP---NF-SLLQSDI-PNLHLNTLLSNFPNCHF----P
gm003838_Glyma0 MVPS--------------------------------------------------------
                * .                                                         

AT2G04038.1     -------YSSSSNSQDLMISNNSTSDEDHHQSIMVLDERKQRRMLSNRESARRSRMRKQR
gm051143_Glyma1 YHKVPDLFS-PQSS---CISSNSTSDEADEQNLSLINERKHRRMISNRESARRSRMRKQK
gm022507_Glyma0 PQVLAD-FSPPQSS---CISSNSTSDEADEQQQSLINERKHRRMISNRESARRSRMRKQK
gm050542_Glyma1 PKVLAD-FSPPQSS---CISSNSTSDEADEQQQSLINERKHRRMISNRESARRSRMRKQK
gm035172_Glyma1 Y-QVPD-FS-PQSS---CISSNSTSDEADDQNLSLINERKHRRMLSNRESARRSRMRKQK
gm000832_Glyma0 P-SGHE-FVVPPSS---CLSSNSTSDEADEIQFNIIDERKHRRMISNRESARRSRMRKQK
gm003838_Glyma0 ----HE-FVVPPSS---CLSNNSTSDEADEIQFNIIDERKHRRMISNRESARRSRMRKQK
                       :  . .*    :*.****** .. .  :::***:***:**************:

AT2G04038.1     HLDELWSQVIRLRNENNCLIDKLNRVSETQNCVLKENSKLKEEASDLRQLVCE-------
gm051143_Glyma1 HLDELWSQVVWLRNENHQLMDKLNHVSESHDQVMQENAQLKEQALELRQMIRDMQIHSPC
gm022507_Glyma0 HLDELWSQVVWLRNENHQLMDKLNHVSESHDKVAQENVQLREEASELRQMICDMQLHSPY
gm050542_Glyma1 HLDELWSQVVWLRNENHQLMDKLNHVSASQDKVVQENVQLREEASELRQMICDMQLHSPY
gm035172_Glyma1 HLDELWSQVVWLRNENHQLIDKLNHVSETHDQVLQENSQLKEEASELRQMIRDMQIHSPC
gm000832_Glyma0 HLDELWSQVVRLRTENHNLIDKLNHVSESHDRVLQENARLKEEASALRQMLADMQIGTAF
gm003838_Glyma0 HLDELWSQVVRLRTENHSLIDKLNHVSESHDRVLQENARLKEEASDLRQMLADMQIGTSF
                *********: **.**: *:****:** ::: * :** :*:*:*  ***:: :       

AT2G04038.1     -------------------------LKSNKNNN--NSFPREFEDN---
gm051143_Glyma1 --PSSFITPLEDHHHDVDHVIPSAYLRSDSSNQLSNSCNNNMDDLLG-
gm022507_Glyma0 HPPP--LSPIDD---DV-----SPYVKSDS------SITDSL-DLLG-
gm050542_Glyma1 HPPP--LSPIDD---DV-----SPYVKSDS------SITDSL-DLLG-
gm035172_Glyma1 GGPNSFITPLED--HDVDHV-PSAYLRSDDSSNQFNSCNNNM-DLLG-
gm000832_Glyma0 ------ACTMED-LEDLPCN-TSQ-LKPDPLNQ---SITPA--DMIHE
gm003838_Glyma0 ------ACTMED-LEDLPCN-TSQLLKPDPLNE---SITPA--DMIHE
                                         ::.:       *      *
BoxShade v3.31 C (beta, 970507) Output
AT2G04038.1     M I P A E - I N G Y F Q Y L S P - - - - - - - - - - - E Y - N V I N M P S S P T S S L N Y L N D L I I N N N N - - - - -
gm051143_Glyma1    M Q S R E V V S G - L N Y L L P S N P C P Y P P N N N N Y T T M F Q N N I N P T F Q F Q R F S N Q I Y G Y N N I N N T P
gm022507_Glyma0    M Q A R E - I T G - L N Y L L P P D P C - - - F - - - N Y - S M V Q N T I - P T F Q L H K L S N Q F Y G L Q K - - - P P
gm050542_Glyma1    M Q A R E - I T G - L N Y L L P S D P C P Y P G - - - H Y - S M V Q N T I - P T F Q L H K L S N Q F Y G L Q N - - - - P
gm035172_Glyma1    M Q T K E V V S S - L S Y L L P S N P C S Y P P - S N N Y T S M I Q N S I - P T F Q F Q R F S N Q I Y G C N N S H N T T
gm000832_Glyma0    M V P S E - I R G - V H Y L A P E N P F L V P P - - - N F - S L L Q S D I - P N L H L N T L L S N F P N C H F - - - - P
gm003838_Glyma0    M V P S - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT2G04038.1     - - - - - - - Y S S S S N S Q D L M I S N N S T S D E D H H Q S I M V L D E R K Q R R M L S N R E S A R R S R M R K Q R
gm051143_Glyma1    Y H K V P D L F S - P Q S S - - - C I S S N S T S D E A D E Q N L S L I N E R K H R R M I S N R E S A R R S R M R K Q K
gm022507_Glyma0    P Q V L A D - F S P P Q S S - - - C I S S N S T S D E A D E Q Q Q S L I N E R K H R R M I S N R E S A R R S R M R K Q K
gm050542_Glyma1    P K V L A D - F S P P Q S S - - - C I S S N S T S D E A D E Q Q Q S L I N E R K H R R M I S N R E S A R R S R M R K Q K
gm035172_Glyma1    Y - Q V P D - F S - P Q S S - - - C I S S N S T S D E A D D Q N L S L I N E R K H R R M L S N R E S A R R S R M R K Q K
gm000832_Glyma0    P - S G H E - F V V P P S S - - - C L S S N S T S D E A D E I Q F N I I D E R K H R R M I S N R E S A R R S R M R K Q K
gm003838_Glyma0    - - - - H E - F V V P P S S - - - C L S N N S T S D E A D E I Q F N I I D E R K H R R M I S N R E S A R R S R M R K Q K
 
AT2G04038.1     H L D E L W S Q V I R L R N E N N C L I D K L N R V S E T Q N C V L K E N S K L K E E A S D L R Q L V C E - - - - - - -
gm051143_Glyma1    H L D E L W S Q V V W L R N E N H Q L M D K L N H V S E S H D Q V M Q E N A Q L K E Q A L E L R Q M I R D M Q I H S P C
gm022507_Glyma0    H L D E L W S Q V V W L R N E N H Q L M D K L N H V S E S H D K V A Q E N V Q L R E E A S E L R Q M I C D M Q L H S P Y
gm050542_Glyma1    H L D E L W S Q V V W L R N E N H Q L M D K L N H V S A S Q D K V V Q E N V Q L R E E A S E L R Q M I C D M Q L H S P Y
gm035172_Glyma1    H L D E L W S Q V V W L R N E N H Q L I D K L N H V S E T H D Q V L Q E N S Q L K E E A S E L R Q M I R D M Q I H S P C
gm000832_Glyma0    H L D E L W S Q V V R L R T E N H N L I D K L N H V S E S H D R V L Q E N A R L K E E A S A L R Q M L A D M Q I G T A F
gm003838_Glyma0    H L D E L W S Q V V R L R T E N H S L I D K L N H V S E S H D R V L Q E N A R L K E E A S D L R Q M L A D M Q I G T S F
 
AT2G04038.1     - - - - - - - - - - - - - - - - - - - - - - - - - L K S N K N N N - - N S F P R E F E D N - - -
gm051143_Glyma1    - - P S S F I T P L E D H H H D V D H V I P S A Y L R S D S S N Q L S N S C N N N M D D L L G -
gm022507_Glyma0    H P P P - - L S P I D D - - - D V - - - - - S P Y V K S D S - - - - - - S I T D S L - D L L G -
gm050542_Glyma1    H P P P - - L S P I D D - - - D V - - - - - S P Y V K S D S - - - - - - S I T D S L - D L L G -
gm035172_Glyma1    G G P N S F I T P L E D - - H D V D H V - P S A Y L R S D D S S N Q F N S C N N N M - D L L G -
gm000832_Glyma0    - - - - - - A C T M E D - L E D L P C N - T S Q - L K P D P L N Q - - - S I T P A - - D M I H E
gm003838_Glyma0    - - - - - - A C T M E D - L E D L P C N - T S Q L L K P D P L N E - - - S I T P A - - D M I H E
 
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