fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G13570.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm019720 not found in 193aa AT2G13570.1 1st_1st 0.539893617 Ia
Pt001769 not found in 211aa AT2G13570.1 1st_1st 0.553191489 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G13570.1     MTEESPEEDHGSPGVAETNPGSP-----SSKTNNNNN-NNKEQDRFLPIANVGRIMKKVL
pt001769_POPTR_ MEDEN--HKNGTDGHSGESPESPCLKSCSSSSNNHNN--SKEQDHFLPIANVGRIMKKEI
gm019720_Glyma0 MTTQH--NNN----------------------NNHQNHSNKEQDRFLPIANVGRIMKKVI
                *  :   ..:                      **::*  .****:************* :

AT2G13570.1     PGNGKISKDAKETVQECVSEFISFVTGEASDKCQREKRKTINGDDIIWAITTLGFEDYVA
pt001769_POPTR_ PGNGKISKDAKETVQECVSEFISFVTGEASDKCQREKRKTINGDDIIWAITTLGFEDYVA
gm019720_Glyma0 PPNGKISKDAKETVQECVSEFISFVTGEASDKCQREKRKTINGDDVIWAITTLGFEDYVE
                * *******************************************:************* 

AT2G13570.1     PLKVYLCKYRDTEGEKVNSPKQQQQRQQQQQIQQQNHHNYQFQEQDQNNNNMSCTSYISH
pt001769_POPTR_ PLKLYLNKYREIEGEKLNVPKQQRME---HQSSQQHHQL----EQEQNMIPPYTSIYSSS
gm019720_Glyma0 PLKTYLQKYKEIEGEKLNIPKQLRSEQRLHQ-HQQNHNN----NHDENNNQPFNGAYASS
                *** ** **:: ****:* *** : .   :*  **:*:     ::::*        * * 

AT2G13570.1     H---HPSPFLPVDHQPFPNIAFSPKSLQKQFPQQHDNNIDSI-HW--
pt001769_POPTR_ ALMSQPPSFMVADHKTYP-LPFSPNSIQKHL--QHQDKVDPVEHW--
gm019720_Glyma0 NLISQPP-YVPTDQK-FS-LPFSPNSIQNQL--RQQEQIDSVGHWYE
                    :*. :: .*:: :. :.***:*:*:::  ::::::*.: **
BoxShade v3.31 C (beta, 970507) Output
AT2G13570.1     M T E E S P E E D H G S P G V A E T N P G S P - - - - - S S K T N N N N N - N N K E Q D R F L P I A N V G R I M K K V L
pt001769_POPTR_    M E D E N - - H K N G T D G H S G E S P E S P C L K S C S S S S N N H N N - - S K E Q D H F L P I A N V G R I M K K E I
gm019720_Glyma0    M T T Q H - - N N N - - - - - - - - - - - - - - - - - - - - - - N N H Q N H S N K E Q D R F L P I A N V G R I M K K V I
 
AT2G13570.1     P G N G K I S K D A K E T V Q E C V S E F I S F V T G E A S D K C Q R E K R K T I N G D D I I W A I T T L G F E D Y V A
pt001769_POPTR_    P G N G K I S K D A K E T V Q E C V S E F I S F V T G E A S D K C Q R E K R K T I N G D D I I W A I T T L G F E D Y V A
gm019720_Glyma0    P P N G K I S K D A K E T V Q E C V S E F I S F V T G E A S D K C Q R E K R K T I N G D D V I W A I T T L G F E D Y V E
 
AT2G13570.1     P L K V Y L C K Y R D T E G E K V N S P K Q Q Q Q R Q Q Q Q Q I Q Q Q N H H N Y Q F Q E Q D Q N N N N M S C T S Y I S H
pt001769_POPTR_    P L K L Y L N K Y R E I E G E K L N V P K Q Q R M E - - - H Q S S Q Q H H Q L - - - - E Q E Q N M I P P Y T S I Y S S S
gm019720_Glyma0    P L K T Y L Q K Y K E I E G E K L N I P K Q L R S E Q R L H Q - H Q Q N H N N - - - - N H D E N N N Q P F N G A Y A S S
 
AT2G13570.1     H - - - H P S P F L P V D H Q P F P N I A F S P K S L Q K Q F P Q Q H D N N I D S I - H W - -
pt001769_POPTR_    A L M S Q P P S F M V A D H K T Y P - L P F S P N S I Q K H L - - Q H Q D K V D P V E H W - -
gm019720_Glyma0    N L I S Q P P - Y V P T D Q K - F S - L P F S P N S I Q N Q L - - R Q Q E Q I D S V G H W Y E
 
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