fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G13570.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp036937 not found in 218aa AT4G14540.1 1st_not 0.470744680 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G13570.1     MTEESPEEDHGSPGVAET---NPGSPSSKTNNNNNNN----------KEQDRFLPIANVG
pp036937_Pp1s83 --------------MADSYGHNAGSPESSPHSDNESGGHYRDQDASVREQDRFLPIANVS
                              :*::   *.***.*..:.:*:..          :***********.

AT2G13570.1     RIMKKVLPGNGKISKDAKETVQECVSEFISFVTGEASDKCQREKRKTINGDDIIWAITTL
pp036937_Pp1s83 RIMKKALPSNAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMSTL
                *****.**.*.********************:********************::**::**

AT2G13570.1     GFEDYVAPLKVYLCKYRDTEGEKVNSPK--QQQQRQQQQQ-----------IQQQNHHNY
pp036937_Pp1s83 GFEDYVEPLKVYLHKYRELEGEKASMAKGGDQQGGKESNQGGMGSMGMAGGINGMN----
                ****** ****** ***: ****.. .*  :**  ::.:*           *:  *    

AT2G13570.1     QFQEQDQNNNNMSCTSYISHHHPSPF-LPVDHQPF-----PNIAFSPKSL--QKQFPQQH
pp036937_Pp1s83 -----GTMNGNM-------HGHGIPVSMQMMQQPYAQQAPPGMIYSPHQMMPQYQMPMQS
                     .  *.**       * *  *. : : :**:     *.: :**:.:  * *:* * 

AT2G13570.1     DNN----IDSIHW
pp036937_Pp1s83 GGNQPRGV-----
                ..*    :
BoxShade v3.31 C (beta, 970507) Output
AT2G13570.1     M T E E S P E E D H G S P G V A E T - - - N P G S P S S K T N N N N N N N - - - - - - - - - - K E Q D R F L P I A N V G
pp036937_Pp1s83    - - - - - - - - - - - - - - M A D S Y G H N A G S P E S S P H S D N E S G G H Y R D Q D A S V R E Q D R F L P I A N V S
 
AT2G13570.1     R I M K K V L P G N G K I S K D A K E T V Q E C V S E F I S F V T G E A S D K C Q R E K R K T I N G D D I I W A I T T L
pp036937_Pp1s83    R I M K K A L P S N A K I S K D A K E T V Q E C V S E F I S F I T G E A S D K C Q R E K R K T I N G D D L L W A M S T L
 
AT2G13570.1     G F E D Y V A P L K V Y L C K Y R D T E G E K V N S P K - - Q Q Q Q R Q Q Q Q Q - - - - - - - - - - - I Q Q Q N H H N Y
pp036937_Pp1s83    G F E D Y V E P L K V Y L H K Y R E L E G E K A S M A K G G D Q Q G G K E S N Q G G M G S M G M A G G I N G M N - - - -
 
AT2G13570.1     Q F Q E Q D Q N N N N M S C T S Y I S H H H P S P F - L P V D H Q P F - - - - - P N I A F S P K S L - - Q K Q F P Q Q H
pp036937_Pp1s83    - - - - - G T M N G N M - - - - - - - H G H G I P V S M Q M M Q Q P Y A Q Q A P P G M I Y S P H Q M M P Q Y Q M P M Q S
 
AT2G13570.1     D N N - - - - I D S I H W
pp036937_Pp1s83    G G N Q P R G V - - - - -
 
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