fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G13570.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb024092 not found in 365aa AT4G14540.1 1st_not 0.462765957 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G13570.1     ------------MTEESPEEDHGSPGVAETNPGSPSSKTNNNNNNNKEQDRFLPIANVGR
Sb024092_Sorbi1 LDRTTLVGGWAAM----PDSDNESGGPSNADFSSP-----------REQDRFLPIANVSR
                            *    *:.*: * * :::: .**           :***********.*

AT2G13570.1     IMKKVLPGNGKISKDAKETVQECVSEFISFVTGEASDKCQREKRKTINGDDIIWAITTLG
Sb024092_Sorbi1 IMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLG
                ****.**.*.********************:********************::**:****

AT2G13570.1     FEDYVAPLKVYLCKYRDTEGEKV-------NSPKQQQQRQQQQQIQQQNHHN--------
Sb024092_Sorbi1 FEDYIEPLKLYLHKFRELEGEKAATGVAGSSSGVSQPHRES----TPSSAHNGAGGPVGG
                ****: ***:** *:*: ****.       .*  .* :*:.      .. **        

AT2G13570.1     --------------YQFQEQDQNNNNMSCTSYISHHHPSPFLPVDHQPFPNIAF------
Sb024092_Sorbi1 YGMYGGAGGGGSGMIMMMGQPMYGGSPPAAS----GYPQP-------PHHQMVMGGKGGA
                                :  *   ... ..:*     :*.*       *. ::.:      

AT2G13570.1     ---------SPKSLQKQFPQQHDNNIDSIHW
Sb024092_Sorbi1 YGHGGGSSSSPSGLGRQ---------DRL--
                         **..* :*         * :
BoxShade v3.31 C (beta, 970507) Output
AT2G13570.1     - - - - - - - - - - - - M T E E S P E E D H G S P G V A E T N P G S P S S K T N N N N N N N K E Q D R F L P I A N V G R
Sb024092_Sorbi1    L D R T T L V G G W A A M - - - - P D S D N E S G G P S N A D F S S P - - - - - - - - - - - R E Q D R F L P I A N V S R
 
AT2G13570.1     I M K K V L P G N G K I S K D A K E T V Q E C V S E F I S F V T G E A S D K C Q R E K R K T I N G D D I I W A I T T L G
Sb024092_Sorbi1    I M K K A L P A N A K I S K D A K E T V Q E C V S E F I S F I T G E A S D K C Q R E K R K T I N G D D L L W A M T T L G
 
AT2G13570.1     F E D Y V A P L K V Y L C K Y R D T E G E K V - - - - - - - N S P K Q Q Q Q R Q Q Q Q Q I Q Q Q N H H N - - - - - - - -
Sb024092_Sorbi1    F E D Y I E P L K L Y L H K F R E L E G E K A A T G V A G S S S G V S Q P H R E S - - - - T P S S A H N G A G G P V G G
 
AT2G13570.1     - - - - - - - - - - - - - - Y Q F Q E Q D Q N N N N M S C T S Y I S H H H P S P F L P V D H Q P F P N I A F - - - - - -
Sb024092_Sorbi1    Y G M Y G G A G G G G S G M I M M M G Q P M Y G G S P P A A S - - - - G Y P Q P - - - - - - - P H H Q M V M G G K G G A
 
AT2G13570.1     - - - - - - - - - S P K S L Q K Q F P Q Q H D N N I D S I H W
Sb024092_Sorbi1    Y G H G G G S S S S P S G L G R Q - - - - - - - - - D R L - -
 
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