fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G13570.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm012959 not found in 152aa AT2G13570.1 not_1st 0.441489361 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G13570.1     MTEESPEEDHGSPGVAETNPGSPSSKTNNNNNNNKEQDRFLPIANVGRIMKKVLPGNGKI
gm012959_Glyma0 -------------------------------------------------MKKVIPPNGKI
                                                                 ****:* ****

AT2G13570.1     SKDAKETVQECVSEFISFVTGEASDKCQREKRKTINGDDIIWAITTLGFEDYVAPLKVYL
gm012959_Glyma0 SKDAKETVQECVSEFISFVTGEASDKCQREKRKTINGDDVIWAITTLGFEDYVEPLKTYL
                ***************************************:************* ***.**

AT2G13570.1     CKYRDTEGEKVNSPKQQQQRQQQQQIQQQNHHNYQFQEQDQNNNNMSCTSYISHHHPSPF
gm012959_Glyma0 QKYKEIEGEKLSIPKQMRSEQR----LQQHHNNYHDQNNQPFNGAYASSNLISQ---PPY
                 **:: ****:. *** :..*:     **:*:**: *:::  *.  :.:. **:   .*:

AT2G13570.1     LPVDHQPFPNIAFSPKSLQKQFPQQHDNNIDSIHW
gm012959_Glyma0 VPTD-QKF-SLTFSPNSIQSQLRQQ--DQIDS---
                :*.* * * .::***:*:*.*: **  ::***
BoxShade v3.31 C (beta, 970507) Output
AT2G13570.1     M T E E S P E E D H G S P G V A E T N P G S P S S K T N N N N N N N K E Q D R F L P I A N V G R I M K K V L P G N G K I
gm012959_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M K K V I P P N G K I
 
AT2G13570.1     S K D A K E T V Q E C V S E F I S F V T G E A S D K C Q R E K R K T I N G D D I I W A I T T L G F E D Y V A P L K V Y L
gm012959_Glyma0    S K D A K E T V Q E C V S E F I S F V T G E A S D K C Q R E K R K T I N G D D V I W A I T T L G F E D Y V E P L K T Y L
 
AT2G13570.1     C K Y R D T E G E K V N S P K Q Q Q Q R Q Q Q Q Q I Q Q Q N H H N Y Q F Q E Q D Q N N N N M S C T S Y I S H H H P S P F
gm012959_Glyma0    Q K Y K E I E G E K L S I P K Q M R S E Q R - - - - L Q Q H H N N Y H D Q N N Q P F N G A Y A S S N L I S Q - - - P P Y
 
AT2G13570.1     L P V D H Q P F P N I A F S P K S L Q K Q F P Q Q H D N N I D S I H W
gm012959_Glyma0    V P T D - Q K F - S L T F S P N S I Q S Q L R Q Q - - D Q I D S - - -
 
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