fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G13570.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm019720 not found in 193aa AT2G13570.1 1st_1st 0.539893617 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G13570.1     MTEESPEEDHGSPGVAETNPGSPSSKTNNNNN----NNKEQDRFLPIANVGRIMKKVLPG
gm019720_Glyma0 MT----------------------TQHNNNNNHQNHSNKEQDRFLPIANVGRIMKKVIPP
                **                      :: *****    .********************:* 

AT2G13570.1     NGKISKDAKETVQECVSEFISFVTGEASDKCQREKRKTINGDDIIWAITTLGFEDYVAPL
gm019720_Glyma0 NGKISKDAKETVQECVSEFISFVTGEASDKCQREKRKTINGDDVIWAITTLGFEDYVEPL
                *******************************************:************* **

AT2G13570.1     KVYLCKYRDTEGEKVNSPKQQQQRQQQQQIQQQNHHNYQFQEQDQNNNNMSCTSYISHHH
gm019720_Glyma0 KTYLQKYKEIEGEKLNIPKQLRSEQRLHQ-HQQNHNN----NHDENNNQPFNGAYASSNL
                *.** **:: ****:* *** :..*: :* :****:*    ::*:***:    :* * : 

AT2G13570.1     PS--PFLPVDHQPFPNIAFSPKSLQKQFPQQHDNNIDSI-HW--
gm019720_Glyma0 ISQPPYVPTD-QKF-SLPFSPNSIQNQLRQQE--QIDSVGHWYE
                 *  *::*.* * * .:.***:*:*:*: **.  :***: **
BoxShade v3.31 C (beta, 970507) Output
AT2G13570.1     M T E E S P E E D H G S P G V A E T N P G S P S S K T N N N N N - - - - N N K E Q D R F L P I A N V G R I M K K V L P G
gm019720_Glyma0    M T - - - - - - - - - - - - - - - - - - - - - - T Q H N N N N N H Q N H S N K E Q D R F L P I A N V G R I M K K V I P P
 
AT2G13570.1     N G K I S K D A K E T V Q E C V S E F I S F V T G E A S D K C Q R E K R K T I N G D D I I W A I T T L G F E D Y V A P L
gm019720_Glyma0    N G K I S K D A K E T V Q E C V S E F I S F V T G E A S D K C Q R E K R K T I N G D D V I W A I T T L G F E D Y V E P L
 
AT2G13570.1     K V Y L C K Y R D T E G E K V N S P K Q Q Q Q R Q Q Q Q Q I Q Q Q N H H N Y Q F Q E Q D Q N N N N M S C T S Y I S H H H
gm019720_Glyma0    K T Y L Q K Y K E I E G E K L N I P K Q L R S E Q R L H Q - H Q Q N H N N - - - - N H D E N N N Q P F N G A Y A S S N L
 
AT2G13570.1     P S - - P F L P V D H Q P F P N I A F S P K S L Q K Q F P Q Q H D N N I D S I - H W - -
gm019720_Glyma0    I S Q P P Y V P T D - Q K F - S L P F S P N S I Q N Q L R Q Q E - - Q I D S V G H W Y E
 
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