fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G13960.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt007328 not found in 549aa AT5G02320.1 1st_not 0.597902097 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G13960.1     --MSSSSNPPVC-SPEKEERSEMKIEIQCMENKQPLAASCSSAS-EGSGCFFLKSPEIAT
pt007328_POPTR_ MSMSSSSIPATSLEAEKEEMDELKIEERCLENKQLTPASSSSQSEEGSGSAILKSPGVYS
                  ***** *... ..**** .*:*** :*:****  .**.** * ****. :**** : :

AT2G13960.1     PATVSSFPRRTSGPMRRAKGGWTPEEDETLRRAVEKYKGKRWKKIAEFFPERTQVQCLHR
pt007328_POPTR_ PATVSPTNRRTTGPIRRAKGGWTPEEDETLRTAVATYKGKSWKKIAEFFPDRSEVQCLHR
                *****.  ***:**:**************** ** .**** *********:*::******

AT2G13960.1     WQKVLNPELVKGPWTQE-------------------------------------------
pt007328_POPTR_ WQKVLDPELVKGPWTQEEDDKIVELVAKYGPTKWSVIAKALPGRIGKQCRERWHNHLNPD
                *****:***********                                           

AT2G13960.1     ------------------------------------------------------------
pt007328_POPTR_ IKKDAWTLEEELALMNAHRIYGNKWAEIAKVLPGRTDNSIKNHWNSSLKKKLDFYLSTGK
                                                                            

AT2G13960.1     ------------------------------------------------------------
pt007328_POPTR_ LPPISKNGFQNGTKDTNKSAVMKTMKESDSAAQTSSGTTDICKLDEDGKDQLESTLVLDV
                                                                            

AT2G13960.1     -----VL-------LSFSCSET--------------------------------------
pt007328_POPTR_ AASSSVLPNEYADSVDLSCCDSESQQKFEDHQDKGIGSGLQFDRSTYGSLYYEPPLVEQL
                     **       :.:**.::                                      

AT2G13960.1     ------------------------FFG---------------------------------
pt007328_POPTR_ DSYPSNMGSVQHENNSCPVSSPIIFFTPPCVKSRDLSAQSPESILRIAAMSFPNTPSIFR
                                        **                                  

AT2G13960.1     ------------------------------------------------------------
pt007328_POPTR_ KRKTAQVDLLPSKIGKVGEETVKDRLDMSVEHEKIENTLEKTAAQDGSLCESPASLGNGT
                                                                            

AT2G13960.1     ------------------------------FHFT--------------------------
pt007328_POPTR_ IRPNDKPFNASPPYRLRSKRTAVFKSVERQLEFTFEKGRSDGTKPTRLSVKRGSPVSEDC
                                              :.**                          

AT2G13960.1     ---------
pt007328_POPTR_ SRATKMGVT
BoxShade v3.31 C (beta, 970507) Output
AT2G13960.1     - - M S S S S N P P V C - S P E K E E R S E M K I E I Q C M E N K Q P L A A S C S S A S - E G S G C F F L K S P E I A T
pt007328_POPTR_    M S M S S S S I P A T S L E A E K E E M D E L K I E E R C L E N K Q L T P A S S S S Q S E E G S G S A I L K S P G V Y S
 
AT2G13960.1     P A T V S S F P R R T S G P M R R A K G G W T P E E D E T L R R A V E K Y K G K R W K K I A E F F P E R T Q V Q C L H R
pt007328_POPTR_    P A T V S P T N R R T T G P I R R A K G G W T P E E D E T L R T A V A T Y K G K S W K K I A E F F P D R S E V Q C L H R
 
AT2G13960.1     W Q K V L N P E L V K G P W T Q E - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt007328_POPTR_    W Q K V L D P E L V K G P W T Q E E D D K I V E L V A K Y G P T K W S V I A K A L P G R I G K Q C R E R W H N H L N P D
 
AT2G13960.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt007328_POPTR_    I K K D A W T L E E E L A L M N A H R I Y G N K W A E I A K V L P G R T D N S I K N H W N S S L K K K L D F Y L S T G K
 
AT2G13960.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt007328_POPTR_    L P P I S K N G F Q N G T K D T N K S A V M K T M K E S D S A A Q T S S G T T D I C K L D E D G K D Q L E S T L V L D V
 
AT2G13960.1     - - - - - V L - - - - - - - L S F S C S E T - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt007328_POPTR_    A A S S S V L P N E Y A D S V D L S C C D S E S Q Q K F E D H Q D K G I G S G L Q F D R S T Y G S L Y Y E P P L V E Q L
 
AT2G13960.1     - - - - - - - - - - - - - - - - - - - - - - - - F F G - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt007328_POPTR_    D S Y P S N M G S V Q H E N N S C P V S S P I I F F T P P C V K S R D L S A Q S P E S I L R I A A M S F P N T P S I F R
 
AT2G13960.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt007328_POPTR_    K R K T A Q V D L L P S K I G K V G E E T V K D R L D M S V E H E K I E N T L E K T A A Q D G S L C E S P A S L G N G T
 
AT2G13960.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - F H F T - - - - - - - - - - - - - - - - - - - - - - - - - -
pt007328_POPTR_    I R P N D K P F N A S P P Y R L R S K R T A V F K S V E R Q L E F T F E K G R S D G T K P T R L S V K R G S P V S E D C
 
AT2G13960.1     - - - - - - - - -
pt007328_POPTR_    S R A T K M G V T
 
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