fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G13960.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb026084 GTDSHLDLNQMPSIGSK in 313/801 AT3G09370.1 1st_not 0.503496503 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G13960.1     MSSSSNPPVCSPEKEERSEMKIEIQCMENKQPLAASCSSASEGSGC----FFLKSPEIAT
Sb026084_Sorbi1 IRRGGDEEVMGAMAEVVQE-----GCVENRQPLAASSSSVSDGSSCGGGGRAGTSPPVSS
                :  ..:  * ..  *  .*      *:**:******.**.*:**.*       .** :::

AT2G13960.1     PATVSSFPRRTSGPMRRAKGGWTPEEDETLRRAVEKYKGKRWKKIAEFFPERTQVQCLHR
Sb026084_Sorbi1 SGNSISVLRRTSGPIRRAKGGWTPEEDETLRKAVEAFKGRNWKKIAEFFQDRTEVQCLHR
                ...  *. ******:****************:*** :**:.******** :**:******

AT2G13960.1     WQKVLNPELVKGPWTQE-------------------------------------------
Sb026084_Sorbi1 WQKVLNPELIKGPWTQEEDEKIIDLVGKYGPTKWSIIAKSLPGRIGKQCRERWHNHLNPE
                *********:*******                                           

AT2G13960.1     -----------------------------------------------------------V
Sb026084_Sorbi1 IRKDAWTPEEERALINAHKVFGNKWAEIAKALPGRTDNSIKNHWNSSLRKKLEAYSNSSV
                                                                           *

AT2G13960.1     L-----------------------------------------------------------
Sb026084_Sorbi1 LSAPKLFVHDDFKDKMKPVGTDSHLDLNQMPSIGSKDVPGRAYRSILSPPSQAYNLDSSG
                *                                                           

AT2G13960.1     -LSFS-------------------------------------------------------
Sb026084_Sorbi1 FLSLSIPTVQPLTKYEMPSLVDGSAVTLAVQGLESDSVRDKGLEIDAVHEKGVEVSSTPD
                 **:*                                                       

AT2G13960.1     --------------------------------------------------CSETFFGFHF
Sb026084_Sorbi1 PVGVELESAPAKRGAVLSSKNELHSTLGPLCYQIPNMEYVAPIRTPLRSECNGSHQTQHF
                                                                  *. :.   **

AT2G13960.1     T-----------------------------------------------------------
Sb026084_Sorbi1 MSPNGYTSPSPTIGKVSSQLTVDSILRIAADSFPGTPSILRKRKRDKATPASGNELKTGG
                                                                            

AT2G13960.1     ------------------------------------------------------------
Sb026084_Sorbi1 VSNDSFYTPNGTNGKDTTPRSFKTAASFLSLGSVDGLLTSVRSFDSSPPYQKRSKRMAII
                                                                            

AT2G13960.1     -------------------------------------
Sb026084_Sorbi1 KSVEKQLDFSADGLDTSGSEMKNSPCHNSQGANSNRT
BoxShade v3.31 C (beta, 970507) Output
AT2G13960.1     M S S S S N P P V C S P E K E E R S E M K I E I Q C M E N K Q P L A A S C S S A S E G S G C - - - - F F L K S P E I A T
Sb026084_Sorbi1    I R R G G D E E V M G A M A E V V Q E - - - - - G C V E N R Q P L A A S S S S V S D G S S C G G G G R A G T S P P V S S
 
AT2G13960.1     P A T V S S F P R R T S G P M R R A K G G W T P E E D E T L R R A V E K Y K G K R W K K I A E F F P E R T Q V Q C L H R
Sb026084_Sorbi1    S G N S I S V L R R T S G P I R R A K G G W T P E E D E T L R K A V E A F K G R N W K K I A E F F Q D R T E V Q C L H R
 
AT2G13960.1     W Q K V L N P E L V K G P W T Q E - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb026084_Sorbi1    W Q K V L N P E L I K G P W T Q E E D E K I I D L V G K Y G P T K W S I I A K S L P G R I G K Q C R E R W H N H L N P E
 
AT2G13960.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - V
Sb026084_Sorbi1    I R K D A W T P E E E R A L I N A H K V F G N K W A E I A K A L P G R T D N S I K N H W N S S L R K K L E A Y S N S S V
 
AT2G13960.1     L - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb026084_Sorbi1    L S A P K L F V H D D F K D K M K P V G T D S H L D L N Q M P S I G S K D V P G R A Y R S I L S P P S Q A Y N L D S S G
 
AT2G13960.1     - L S F S - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb026084_Sorbi1    F L S L S I P T V Q P L T K Y E M P S L V D G S A V T L A V Q G L E S D S V R D K G L E I D A V H E K G V E V S S T P D
 
AT2G13960.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - C S E T F F G F H F
Sb026084_Sorbi1    P V G V E L E S A P A K R G A V L S S K N E L H S T L G P L C Y Q I P N M E Y V A P I R T P L R S E C N G S H Q T Q H F
 
AT2G13960.1     T - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb026084_Sorbi1    M S P N G Y T S P S P T I G K V S S Q L T V D S I L R I A A D S F P G T P S I L R K R K R D K A T P A S G N E L K T G G
 
AT2G13960.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb026084_Sorbi1    V S N D S F Y T P N G T N G K D T T P R S F K T A A S F L S L G S V D G L L T S V R S F D S S P P Y Q K R S K R M A I I
 
AT2G13960.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb026084_Sorbi1    K S V E K Q L D F S A D G L D T S G S E M K N S P C H N S Q G A N S N R T
 
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