fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G13960.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb032370 not found in 267aa AT5G11510.1 not_not 0.412587412 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G13960.1     -MSSSSNPPVC-------------SPEKEERSEMKIEIQCMENKQPLAASCSSASEGSGC
Sb032370_Sorbi1 HWDESLGPYLAFKWRFSFLFSFMMTGEKQ-----------MTSKGTESSSSSVPPDG---
                  ..* .* :.             : **:           * .* . ::*.* ..:*   

AT2G13960.1     FFLKSPEIATPATVSSFPR--------RTSGPMRR-AKGGWTPEEDETLRRAVEKYKGKR
Sb032370_Sorbi1 ------------VVSREPQKGGRLPNGRTTGPARRSSKGNWTPEEDDILREAVETYKGKN
                            .**  *:        **:** ** :**.******: **.***.****.

AT2G13960.1     WKKIAEFFPERTQVQCLHRWQKVLNPELVKGPWTQ---EVLLSF----------------
Sb032370_Sorbi1 WKKIAESFPGRTDVQCLHRWQKVLNPELVKGPWSKEEDEIIIQMVNKHGPKKWSTIAQAL
                ****** ** **:********************::   *:::.:                

AT2G13960.1     ------SCSETFFGF---------------------HFT--------------------
Sb032370_Sorbi1 PGRIGKQCRERWHNHLNPGINKDAWTQDEEIRLIHAHQTYGNKWAELTKFLPGRYIFFP
                      .* * :...                     * *
BoxShade v3.31 C (beta, 970507) Output
AT2G13960.1     - M S S S S N P P V C - - - - - - - - - - - - - S P E K E E R S E M K I E I Q C M E N K Q P L A A S C S S A S E G S G C
Sb032370_Sorbi1    H W D E S L G P Y L A F K W R F S F L F S F M M T G E K Q - - - - - - - - - - - M T S K G T E S S S S S V P P D G - - -
 
AT2G13960.1     F F L K S P E I A T P A T V S S F P R - - - - - - - - R T S G P M R R - A K G G W T P E E D E T L R R A V E K Y K G K R
Sb032370_Sorbi1    - - - - - - - - - - - - V V S R E P Q K G G R L P N G R T T G P A R R S S K G N W T P E E D D I L R E A V E T Y K G K N
 
AT2G13960.1     W K K I A E F F P E R T Q V Q C L H R W Q K V L N P E L V K G P W T Q - - - E V L L S F - - - - - - - - - - - - - - - -
Sb032370_Sorbi1    W K K I A E S F P G R T D V Q C L H R W Q K V L N P E L V K G P W S K E E D E I I I Q M V N K H G P K K W S T I A Q A L
 
AT2G13960.1     - - - - - - S C S E T F F G F - - - - - - - - - - - - - - - - - - - - - H F T - - - - - - - - - - - - - - - - - - - -
Sb032370_Sorbi1    P G R I G K Q C R E R W H N H L N P G I N K D A W T Q D E E I R L I H A H Q T Y G N K W A E L T K F L P G R Y I F F P
 
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