fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G13960.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb026084 GTDSHLDLNQMPSIGSK in 313/801 AT3G09370.1 1st_not 0.503496503 II
Sb032370 not found in 267aa AT5G11510.1 not_not 0.412587412 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G13960.1     MSSSSNPPVCSPEKEERSEMKIEIQCMENKQPLAASCSSASEGSGC----FFLKSPEIAT
Sb026084_Sorbi1 IRRGGDEEVMGAMAEVVQE-----GCVENRQPLAASSSSVSDGSSCGGGGRAGTSPPVSS
Sb032370_Sorbi1 ----HWDESLGPYLAFKWRFSFLFSFMMTGEKQMTSKGTESSSSSVPPDGVVSREPQKGG
                          ..      .       : . :   :* .: *..*.         .*  . 

AT2G13960.1     PATVSSFPR----RTSGPMRR-AKGGWTPEEDETLRRAVEKYKGKRWKKIAEFFPERTQV
Sb026084_Sorbi1 SGNSISVLR----RTSGPIRR-AKGGWTPEEDETLRKAVEAFKGRNWKKIAEFFQDRTEV
Sb032370_Sorbi1 --------RLPNGRTTGPARRSSKGNWTPEEDDILREAVETYKGKNWKKIAESFPGRTDV
                        *    **:** ** :**.******: **.*** :**:.****** *  **:*

AT2G13960.1     QCLHRWQKVLNPELVKGPWTQE--------------------------------------
Sb026084_Sorbi1 QCLHRWQKVLNPELIKGPWTQEEDEKIIDLVGKYGPTKWSIIAKSLPGRIGKQCRERWHN
Sb032370_Sorbi1 QCLHRWQKVLNPELVKGPWSKEEDEIIIQMVNKHGPKKWSTIAQALPGRIGKQCRERWHN
                **************:****::*                                      

AT2G13960.1     ------------------------------------------------------------
Sb026084_Sorbi1 HLNPEIRKDAWTPEEERALINAHKVFGNKWAEIAKALPGRTDNSIKNHWNSSLRKKLEAY
Sb032370_Sorbi1 HLNPGINKDAWTQDEEIRLIHAHQTYGNKWAELTKFLPGRY-------------------
                                                                            

AT2G13960.1     ----VL------------------------------------------------------
Sb026084_Sorbi1 SNSSVLSAPKLFVHDDFKDKMKPVGTDSHLDLNQMPSIGSKDVPGRAYRSILSPPSQAYN
Sb032370_Sorbi1 ----IF------------------------------------------------------
                    ::                                                      

AT2G13960.1     ------LSFS--------------------------------------------------
Sb026084_Sorbi1 LDSSGFLSLSIPTVQPLTKYEMPSLVDGSAVTLAVQGLESDSVRDKGLEIDAVHEKGVEV
Sb032370_Sorbi1 ------------------------------------------------------------
                                                                            

AT2G13960.1     -------------------------------------------------------CSETF
Sb026084_Sorbi1 SSTPDPVGVELESAPAKRGAVLSSKNELHSTLGPLCYQIPNMEYVAPIRTPLRSECNGSH
Sb032370_Sorbi1 ------------------------------------------------------------
                                                                            

AT2G13960.1     FGFHFT------------------------------------------------------
Sb026084_Sorbi1 QTQHFMSPNGYTSPSPTIGKVSSQLTVDSILRIAADSFPGTPSILRKRKRDKATPASGNE
Sb032370_Sorbi1 -------------------------------------FP---------------------
                                                                            

AT2G13960.1     ------------------------------------------------------------
Sb026084_Sorbi1 LKTGGVSNDSFYTPNGTNGKDTTPRSFKTAASFLSLGSVDGLLTSVRSFDSSPPYQKRSK
Sb032370_Sorbi1 ------------------------------------------------------------
                                                                            

AT2G13960.1     ------------------------------------------
Sb026084_Sorbi1 RMAIIKSVEKQLDFSADGLDTSGSEMKNSPCHNSQGANSNRT
Sb032370_Sorbi1 ------------------------------------------
BoxShade v3.31 C (beta, 970507) Output
AT2G13960.1     M S S S S N P P V C S P E K E E R S E M K I E I Q C M E N K Q P L A A S C S S A S E G S G C - - - - F F L K S P E I A T
Sb026084_Sorbi1    I R R G G D E E V M G A M A E V V Q E - - - - - G C V E N R Q P L A A S S S S V S D G S S C G G G G R A G T S P P V S S
Sb032370_Sorbi1    - - - - H W D E S L G P Y L A F K W R F S F L F S F M M T G E K Q M T S K G T E S S S S S V P P D G V V S R E P Q K G G
 
AT2G13960.1     P A T V S S F P R - - - - R T S G P M R R - A K G G W T P E E D E T L R R A V E K Y K G K R W K K I A E F F P E R T Q V
Sb026084_Sorbi1    S G N S I S V L R - - - - R T S G P I R R - A K G G W T P E E D E T L R K A V E A F K G R N W K K I A E F F Q D R T E V
Sb032370_Sorbi1    - - - - - - - - R L P N G R T T G P A R R S S K G N W T P E E D D I L R E A V E T Y K G K N W K K I A E S F P G R T D V
 
AT2G13960.1     Q C L H R W Q K V L N P E L V K G P W T Q E - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb026084_Sorbi1    Q C L H R W Q K V L N P E L I K G P W T Q E E D E K I I D L V G K Y G P T K W S I I A K S L P G R I G K Q C R E R W H N
Sb032370_Sorbi1    Q C L H R W Q K V L N P E L V K G P W S K E E D E I I I Q M V N K H G P K K W S T I A Q A L P G R I G K Q C R E R W H N
 
AT2G13960.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb026084_Sorbi1    H L N P E I R K D A W T P E E E R A L I N A H K V F G N K W A E I A K A L P G R T D N S I K N H W N S S L R K K L E A Y
Sb032370_Sorbi1    H L N P G I N K D A W T Q D E E I R L I H A H Q T Y G N K W A E L T K F L P G R Y - - - - - - - - - - - - - - - - - - -
 
AT2G13960.1     - - - - V L - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb026084_Sorbi1    S N S S V L S A P K L F V H D D F K D K M K P V G T D S H L D L N Q M P S I G S K D V P G R A Y R S I L S P P S Q A Y N
Sb032370_Sorbi1    - - - - I F - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT2G13960.1     - - - - - - L S F S - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb026084_Sorbi1    L D S S G F L S L S I P T V Q P L T K Y E M P S L V D G S A V T L A V Q G L E S D S V R D K G L E I D A V H E K G V E V
Sb032370_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT2G13960.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - C S E T F
Sb026084_Sorbi1    S S T P D P V G V E L E S A P A K R G A V L S S K N E L H S T L G P L C Y Q I P N M E Y V A P I R T P L R S E C N G S H
Sb032370_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT2G13960.1     F G F H F T - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb026084_Sorbi1    Q T Q H F M S P N G Y T S P S P T I G K V S S Q L T V D S I L R I A A D S F P G T P S I L R K R K R D K A T P A S G N E
Sb032370_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - F P - - - - - - - - - - - - - - - - - - - - -
 
AT2G13960.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb026084_Sorbi1    L K T G G V S N D S F Y T P N G T N G K D T T P R S F K T A A S F L S L G S V D G L L T S V R S F D S S P P Y Q K R S K
Sb032370_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT2G13960.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb026084_Sorbi1    R M A I I K S V E K Q L D F S A D G L D T S G S E M K N S P C H N S Q G A N S N R T
Sb032370_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
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