fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G14760.1 NGMDIGLDLKLNALTR at 317/328 in AT2G14760.1
NGMDIGLDLKLNALTR at 330/341 in AT2G14760.3
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm039439 not found in 231aa AT2G14760.1 1st_1st 0.244663382 Ib
Pt021116 not found in 360aa AT2G14760.1 1st_1st 0.307060755 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G14760.1     MEAM-----GEWSTGLGGIYT-EEADFMNQLLASYEQPCGGSSS-----------ETTAT
gm039439_Glyma1 ------------------------------ML------------------------TTQI
pt021116_POPTR_ MESIGSMAEGEWSS-LGGMYTSEEADFMAQLLGNCPNQVDSSSNFGVPSSFWPNHEPTTD
                                              :*                        .*  

AT2G14760.1     L---------------TAYHHQGSQWNGGFCFSQESSSYSGYCAAM-PRQEEDNNGMED-
gm039439_Glyma1 L---------------LSIFHK-------------KVAIKYFASFV-P-------SLAD-
pt021116_POPTR_ MEGANECLFYSLDFANINLHH----------FSQGSSSYSGGSGILFPNTSQDSYYMSDS
                :                  .*              . : .  .. : *        : * 

AT2G14760.1     ----ATINTNL---------YLVGEETSECDATEYSGKSLLP-----LETVAENHDHSML
gm039439_Glyma1 ----IVTEESV---------KL---ENSECNQME-------P-----IVFPSKQ-----L
pt021116_POPTR_ HPILANNNSSMSMDFCMGDSYLV--EGDDCSNQEMSNSNEEPGGNQTVAALPEND----F
                       : .:          *   * .:*.  *       *     :   .::     :

AT2G14760.1     QPENSLTTTT-----DEKMFNQCESSKKRTRATTTDKNKRANKARRSQKCVEMSGENEN-
gm039439_Glyma1 QLKRKLDVPA-----EDKMNKGSENQKKRARAL-----------KDGQGCMKNTWSKKNQ
pt021116_POPTR_ RAKREPEMPASELPLEDKSSNPPQISKKRSRNS-----------GDAQKNKRNASSKKSQ
                : :..   .:     ::*  :  : .***:*               .*   . : .::. 

AT2G14760.1     ---SGEEEYTEKAAGKRKTKPLKPQKTCCSDDESNGGDT----FLSKEDGEDSKALNLNG
gm039439_Glyma1 KHASNGEEAEETNAG--------------SDGQSSSSN------MSEDDNISKSALNSNG
pt021116_POPTR_ KVASTSNNDEGSNAG--LNGP--ASSGCCSEDESNASHELNRGASSSLSSKGTATLNSSG
                   *  ::   . **              *:.:*....       *. .. .. :** .*

AT2G14760.1     KTRASRGAATDPQSLYARKRRERINERLRILQHLVPNGTKVDISTMLEEAVQYVKFLQLQ
gm039439_Glyma1 KTRASRGSATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVNYVKFLQLQ
pt021116_POPTR_ KTRASRGAATDPQSLYARKRRERINERLRILQTLVPNGTKVDISTMLEEAVQYVKFLQLQ
                *******:************************ ******************:********

AT2G14760.1     IKLLSSDDLWMYAPIAYNGMDIGLD---LKLNALTR
gm039439_Glyma1 IKLLSSDDLWMYAPLAYNGLDIGLN-----LNSLSL
pt021116_POPTR_ IKLLSSEDLWMYAPIAYNGMDIGLDHLKMRLK----
                ******:*******:****:****:     *:
BoxShade v3.31 C (beta, 970507) Output
AT2G14760.1     M E A M - - - - - G E W S T G L G G I Y T - E E A D F M N Q L L A S Y E Q P C G G S S S - - - - - - - - - - - E T T A T
gm039439_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M L - - - - - - - - - - - - - - - - - - - - - - - - T T Q I
pt021116_POPTR_    M E S I G S M A E G E W S S - L G G M Y T S E E A D F M A Q L L G N C P N Q V D S S S N F G V P S S F W P N H E P T T D
 
AT2G14760.1     L - - - - - - - - - - - - - - - T A Y H H Q G S Q W N G G F C F S Q E S S S Y S G Y C A A M - P R Q E E D N N G M E D -
gm039439_Glyma1    L - - - - - - - - - - - - - - - L S I F H K - - - - - - - - - - - - - K V A I K Y F A S F V - P - - - - - - - S L A D -
pt021116_POPTR_    M E G A N E C L F Y S L D F A N I N L H H - - - - - - - - - - F S Q G S S S Y S G G S G I L F P N T S Q D S Y Y M S D S
 
AT2G14760.1     - - - - A T I N T N L - - - - - - - - - Y L V G E E T S E C D A T E Y S G K S L L P - - - - - L E T V A E N H D H S M L
gm039439_Glyma1    - - - - I V T E E S V - - - - - - - - - K L - - - E N S E C N Q M E - - - - - - - P - - - - - I V F P S K Q - - - - - L
pt021116_POPTR_    H P I L A N N N S S M S M D F C M G D S Y L V - - E G D D C S N Q E M S N S N E E P G G N Q T V A A L P E N D - - - - F
 
AT2G14760.1     Q P E N S L T T T T - - - - - D E K M F N Q C E S S K K R T R A T T T D K N K R A N K A R R S Q K C V E M S G E N E N -
gm039439_Glyma1    Q L K R K L D V P A - - - - - E D K M N K G S E N Q K K R A R A L - - - - - - - - - - - K D G Q G C M K N T W S K K N Q
pt021116_POPTR_    R A K R E P E M P A S E L P L E D K S S N P P Q I S K K R S R N S - - - - - - - - - - - G D A Q K N K R N A S S K K S Q
 
AT2G14760.1     - - - S G E E E Y T E K A A G K R K T K P L K P Q K T C C S D D E S N G G D T - - - - F L S K E D G E D S K A L N L N G
gm039439_Glyma1    K H A S N G E E A E E T N A G - - - - - - - - - - - - - - S D G Q S S S S N - - - - - - M S E D D N I S K S A L N S N G
pt021116_POPTR_    K V A S T S N N D E G S N A G - - L N G P - - A S S G C C S E D E S N A S H E L N R G A S S S L S S K G T A T L N S S G
 
AT2G14760.1     K T R A S R G A A T D P Q S L Y A R K R R E R I N E R L R I L Q H L V P N G T K V D I S T M L E E A V Q Y V K F L Q L Q
gm039439_Glyma1    K T R A S R G S A T D P Q S L Y A R K R R E R I N E R L R I L Q N L V P N G T K V D I S T M L E E A V N Y V K F L Q L Q
pt021116_POPTR_    K T R A S R G A A T D P Q S L Y A R K R R E R I N E R L R I L Q T L V P N G T K V D I S T M L E E A V Q Y V K F L Q L Q
 
AT2G14760.1     I K L L S S D D L W M Y A P I A Y N G M D I G L D - - - L K L N A L T R
gm039439_Glyma1    I K L L S S D D L W M Y A P L A Y N G L D I G L N - - - - - L N S L S L
pt021116_POPTR_    I K L L S S E D L W M Y A P I A Y N G M D I G L D H L K M R L K - - - -
 
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