fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G14760.1 NGMDIGLDLKLNALTR at 317/328 in AT2G14760.1
NGMDIGLDLKLNALTR at 330/341 in AT2G14760.3
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt021116 not found in 360aa AT2G14760.1 1st_1st 0.307060755 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G14760.1     MEAM-----GEWSTGLGGIYT-EEADFMNQLLASYEQPCGGSSS-----------ETTAT
pt021116_POPTR_ MESIGSMAEGEWSS-LGGMYTSEEADFMAQLLGNCPNQVDSSSNFGVPSSFWPNHEPTTD
                **::     ****: ***:** ****** ***..  :  ..**.           *.*: 

AT2G14760.1     LTA---------------YHHQGSQWNGGFCFSQESSSYSGYCAAM-PRQEEDNNGMED-
pt021116_POPTR_ MEGANECLFYSLDFANINLHH----------FSQGSSSYSGGSGILFPNTSQDSYYMSDS
                : .                **          *** ****** .. : *. .:*.  *.* 

AT2G14760.1     ----ATINTNL---------YLVGEETSECDATEYSGKSLLP--LETVA---ENHDHSML
pt021116_POPTR_ HPILANNNSSMSMDFCMGDSYLV--EGDDCSNQEMSNSNEEPGGNQTVAALPENDFRAKR
                    *. *:.:         ***  * .:*.  * *...  *   :***   **. ::  

AT2G14760.1     QPENSLTT-TTDEKMFNQCESSKKRTRAT-TTDKNKRANKARRSQKCVEMSGENENSGEE
pt021116_POPTR_ EPEMPASELPLEDKSSNPPQISKKRSRNSGDAQKNKRNASSKKSQKVASTSNNDEGSNAG
                :** . :  . ::*  *  : ****:* :  ::****  .:::*** .. *.::*.*.  

AT2G14760.1     EYTEKAAGKRKTKPLKPQKTCCSDDESN-------GGDTFLSKEDGEDSKALNLNGKTRA
pt021116_POPTR_ LNGPASSG------------CCSEDESNASHELNRGASSSLSS---KGTATLNSSGKTRA
                     ::*            ***:****       *..: **.   :.: :** .*****

AT2G14760.1     SRGAATDPQSLYARKRRERINERLRILQHLVPNGTKVDISTMLEEAVQYVKFLQLQIKLL
pt021116_POPTR_ SRGAATDPQSLYARKRRERINERLRILQTLVPNGTKVDISTMLEEAVQYVKFLQLQIKLL
                **************************** *******************************

AT2G14760.1     SSDDLWMYAPIAYNGMDIGLD-LKLNALTR
pt021116_POPTR_ SSEDLWMYAPIAYNGMDIGLDHLKMRLK--
                **:****************** **:.
BoxShade v3.31 C (beta, 970507) Output
AT2G14760.1     M E A M - - - - - G E W S T G L G G I Y T - E E A D F M N Q L L A S Y E Q P C G G S S S - - - - - - - - - - - E T T A T
pt021116_POPTR_    M E S I G S M A E G E W S S - L G G M Y T S E E A D F M A Q L L G N C P N Q V D S S S N F G V P S S F W P N H E P T T D
 
AT2G14760.1     L T A - - - - - - - - - - - - - - - Y H H Q G S Q W N G G F C F S Q E S S S Y S G Y C A A M - P R Q E E D N N G M E D -
pt021116_POPTR_    M E G A N E C L F Y S L D F A N I N L H H - - - - - - - - - - F S Q G S S S Y S G G S G I L F P N T S Q D S Y Y M S D S
 
AT2G14760.1     - - - - A T I N T N L - - - - - - - - - Y L V G E E T S E C D A T E Y S G K S L L P - - L E T V A - - - E N H D H S M L
pt021116_POPTR_    H P I L A N N N S S M S M D F C M G D S Y L V - - E G D D C S N Q E M S N S N E E P G G N Q T V A A L P E N D F R A K R
 
AT2G14760.1     Q P E N S L T T - T T D E K M F N Q C E S S K K R T R A T - T T D K N K R A N K A R R S Q K C V E M S G E N E N S G E E
pt021116_POPTR_    E P E M P A S E L P L E D K S S N P P Q I S K K R S R N S G D A Q K N K R N A S S K K S Q K V A S T S N N D E G S N A G
 
AT2G14760.1     E Y T E K A A G K R K T K P L K P Q K T C C S D D E S N - - - - - - - G G D T F L S K E D G E D S K A L N L N G K T R A
pt021116_POPTR_    L N G P A S S G - - - - - - - - - - - - C C S E D E S N A S H E L N R G A S S S L S S - - - K G T A T L N S S G K T R A
 
AT2G14760.1     S R G A A T D P Q S L Y A R K R R E R I N E R L R I L Q H L V P N G T K V D I S T M L E E A V Q Y V K F L Q L Q I K L L
pt021116_POPTR_    S R G A A T D P Q S L Y A R K R R E R I N E R L R I L Q T L V P N G T K V D I S T M L E E A V Q Y V K F L Q L Q I K L L
 
AT2G14760.1     S S D D L W M Y A P I A Y N G M D I G L D - L K L N A L T R
pt021116_POPTR_    S S E D L W M Y A P I A Y N G M D I G L D H L K M R L K - -
 
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