fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G14760.1 NGMDIGLDLKLNALTR at 317/328 in AT2G14760.1
NGMDIGLDLKLNALTR at 330/341 in AT2G14760.3
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm039439 not found in 231aa AT2G14760.1 1st_1st 0.244663382 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G14760.1     MEAMGEWSTGLGGIYTEEADFMNQLLASYEQPCGGSSSETTATLTAYHHQGSQWNGGFCF
gm039439_Glyma1 ------------------------ML-------------TTQILLSIFHK----------
                                        :*             **  * : .*:          

AT2G14760.1     SQESSSYSGYCAAMPRQEEDNNGMEDATINTNLYLVGEETSECDATEYSGKSLLPLETVA
gm039439_Glyma1 ---KVAIKYFASFVP-------SLADIVTEESVKL---ENSECNQME-------PIVFPS
                   . : . :.: :*       .: * . : .: *   *.***:  *       *:   :

AT2G14760.1     ENHDHSMLQPENSLTTTTDEKMFNQCESSKKRTRATTTDKNKRANKARRSQKCVEMSGEN
gm039439_Glyma1 KQ-----LQLKRKLDVPAEDKMNKGSENQKKRARAL-----------KDGQGCMKNTWSK
                ::     ** :..* ..:::** : .*..***:**            : .* *:: : .:

AT2G14760.1     EN----SGEEEYTEKAAGKRKTKPLKPQKTCCSDDESNGGDTFLSKEDGEDSKALNLNGK
gm039439_Glyma1 KNQKHASNGEEAEETNAG--------------SDGQSSSSN--MSEDDNISKSALNSNGK
                :*    *. **  *. **              **.:*...:  :*::*. ...*** ***

AT2G14760.1     TRASRGAATDPQSLYARKRRERINERLRILQHLVPNGTKVDISTMLEEAVQYVKFLQLQI
gm039439_Glyma1 TRASRGSATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVNYVKFLQLQI
                ******:************************:******************:*********

AT2G14760.1     KLLSSDDLWMYAPIAYNGMDIGLDLKLNALTR
gm039439_Glyma1 KLLSSDDLWMYAPLAYNGLDIGLN--LNSLSL
                *************:****:****:  **:*:
BoxShade v3.31 C (beta, 970507) Output
AT2G14760.1     M E A M G E W S T G L G G I Y T E E A D F M N Q L L A S Y E Q P C G G S S S E T T A T L T A Y H H Q G S Q W N G G F C F
gm039439_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - M L - - - - - - - - - - - - - T T Q I L L S I F H K - - - - - - - - - -
 
AT2G14760.1     S Q E S S S Y S G Y C A A M P R Q E E D N N G M E D A T I N T N L Y L V G E E T S E C D A T E Y S G K S L L P L E T V A
gm039439_Glyma1    - - - K V A I K Y F A S F V P - - - - - - - S L A D I V T E E S V K L - - - E N S E C N Q M E - - - - - - - P I V F P S
 
AT2G14760.1     E N H D H S M L Q P E N S L T T T T D E K M F N Q C E S S K K R T R A T T T D K N K R A N K A R R S Q K C V E M S G E N
gm039439_Glyma1    K Q - - - - - L Q L K R K L D V P A E D K M N K G S E N Q K K R A R A L - - - - - - - - - - - K D G Q G C M K N T W S K
 
AT2G14760.1     E N - - - - S G E E E Y T E K A A G K R K T K P L K P Q K T C C S D D E S N G G D T F L S K E D G E D S K A L N L N G K
gm039439_Glyma1    K N Q K H A S N G E E A E E T N A G - - - - - - - - - - - - - - S D G Q S S S S N - - M S E D D N I S K S A L N S N G K
 
AT2G14760.1     T R A S R G A A T D P Q S L Y A R K R R E R I N E R L R I L Q H L V P N G T K V D I S T M L E E A V Q Y V K F L Q L Q I
gm039439_Glyma1    T R A S R G S A T D P Q S L Y A R K R R E R I N E R L R I L Q N L V P N G T K V D I S T M L E E A V N Y V K F L Q L Q I
 
AT2G14760.1     K L L S S D D L W M Y A P I A Y N G M D I G L D L K L N A L T R
gm039439_Glyma1    K L L S S D D L W M Y A P L A Y N G L D I G L N - - L N S L S L
 
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