fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G16720.1 EKIGPDLNLELRISPP at 188/269 in AT2G16720.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp005220 not found in 421aa AT1G66230.1 1st_not 0.412350597 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G16720.1     MGRSPCCEKEHMNKGAWTKEEDERLVSYIKSHGEGCWRSLPRAAGLLRCGKSCRLRWINY
pp005220_Pp1s42 MGRKPCCEKVGLRRGPWTSEEDQKLVSHITNNGLSCWRAIPKLAGLLRCGKSCRLRWTNY
                ***.*****  :.:*.**.***::***:*..:* .***::*: ************** **

AT2G16720.1     LRPDLKRGNFTHDEDELIIKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHIKRKLLSKG
pp005220_Pp1s42 LRPDLKRGIFSEAEENLILDLHATLGNRWSRIAAQLPGRTDNEIKNYWNTRLKKRLRSQG
                ******** *:. *::**:.**: ***:** ***:***************::*::* *:*

AT2G16720.1     IDPATHRGINEAKISDLKKTKDQIVKDVSFVTKFEETDKSGDQKQNKYIRNGLVCKEERV
pp005220_Pp1s42 LDPNTHLPLEDSKLDDTEDDTDDEGGDSSDVTM---SDASKSEKRSKKKSK----PKETV
                :** **  ::::*:.* :. .*:   * * **    :* * .:*:.*   :     :* *

AT2G16720.1     VVEEKIGPDLNLELRI-----------------SP------P---WQNQREISTCTASRF
pp005220_Pp1s42 KVRQPKGPKPAPQLKMCQSDEGPVLLKVPKAPKSPISVNPGPGCNYDDDSEHSSSSTVTT
                 *.:  **.   :*::                 **      *   :::: * *:.::   

AT2G16720.1     YMENDMECSSETVKCQTENSS-------------SISYSS--------------------
pp005220_Pp1s42 KSHEDHRDSSDFIKALTSVSSFPEAELWSCIKPITNSFSSTALLSEWDSYRAFDSSLFPS
                  .:* . **: :*. *. **             : *:**                    

AT2G16720.1     --------------IDISSSNV---------GYDFLG--LKTRIL---------------
pp005220_Pp1s42 SYPQLNSGLPKLEDVNSKSSAVASPVQGMLPAYNPMGMEMQTRMQFSSQLTHEIGQNYGG
                              :: .** *         .*: :*  ::**:                

AT2G16720.1     -----------------------------------------DFR----------SLEMK-
pp005220_Pp1s42 IFQETCYPQPDMGMSWSMHAELSHCGTESLFATPNPANAPSNFEEVPQPSPCTTSQELQR
                                                         :*.          * *:: 

AT2G16720.1     --------
pp005220_Pp1s42 LAALLDLI
BoxShade v3.31 C (beta, 970507) Output
AT2G16720.1     M G R S P C C E K E H M N K G A W T K E E D E R L V S Y I K S H G E G C W R S L P R A A G L L R C G K S C R L R W I N Y
pp005220_Pp1s42    M G R K P C C E K V G L R R G P W T S E E D Q K L V S H I T N N G L S C W R A I P K L A G L L R C G K S C R L R W T N Y
 
AT2G16720.1     L R P D L K R G N F T H D E D E L I I K L H S L L G N K W S L I A A R L P G R T D N E I K N Y W N T H I K R K L L S K G
pp005220_Pp1s42    L R P D L K R G I F S E A E E N L I L D L H A T L G N R W S R I A A Q L P G R T D N E I K N Y W N T R L K K R L R S Q G
 
AT2G16720.1     I D P A T H R G I N E A K I S D L K K T K D Q I V K D V S F V T K F E E T D K S G D Q K Q N K Y I R N G L V C K E E R V
pp005220_Pp1s42    L D P N T H L P L E D S K L D D T E D D T D D E G G D S S D V T M - - - S D A S K S E K R S K K K S K - - - - P K E T V
 
AT2G16720.1     V V E E K I G P D L N L E L R I - - - - - - - - - - - - - - - - - S P - - - - - - P - - - W Q N Q R E I S T C T A S R F
pp005220_Pp1s42    K V R Q P K G P K P A P Q L K M C Q S D E G P V L L K V P K A P K S P I S V N P G P G C N Y D D D S E H S S S S T V T T
 
AT2G16720.1     Y M E N D M E C S S E T V K C Q T E N S S - - - - - - - - - - - - - S I S Y S S - - - - - - - - - - - - - - - - - - - -
pp005220_Pp1s42    K S H E D H R D S S D F I K A L T S V S S F P E A E L W S C I K P I T N S F S S T A L L S E W D S Y R A F D S S L F P S
 
AT2G16720.1     - - - - - - - - - - - - - - I D I S S S N V - - - - - - - - - G Y D F L G - - L K T R I L - - - - - - - - - - - - - - -
pp005220_Pp1s42    S Y P Q L N S G L P K L E D V N S K S S A V A S P V Q G M L P A Y N P M G M E M Q T R M Q F S S Q L T H E I G Q N Y G G
 
AT2G16720.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - D F R - - - - - - - - - - S L E M K -
pp005220_Pp1s42    I F Q E T C Y P Q P D M G M S W S M H A E L S H C G T E S L F A T P N P A N A P S N F E E V P Q P S P C T T S Q E L Q R
 
AT2G16720.1     - - - - - - - -
pp005220_Pp1s42    L A A L L D L I
 
0