fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G16720.1 EKIGPDLNLELRISPP at 188/269 in AT2G16720.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os034636 PLKCPDLNLDLCISLP in 189/251 AT4G38620.1 1st_not 0.551792828 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G16720.1     MGRSPCCEKEHMNKGAWTKEEDERLVSYIKSHGEGCWRSLPRAAGLLRCGKSCRLRWINY
Os034636_Os09t0 MGRSPCCEKAHTNKGAWTKEEDDRLIAYIKAHGEGCWRSLPKAAGLLRCGKSCRLRWINY
                ********* * **********:**::***:**********:******************

AT2G16720.1     LRPDLKRGNFTHDEDELIIKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHIKRKLLSKG
Os034636_Os09t0 LRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLLSRG
                ***********.:********************.******************:*****:*

AT2G16720.1     IDPATHRGIN----------EAKISDLKKTKDQIVK------DVSFVTKFEETDKSGDQK
Os034636_Os09t0 IDPVTHRPINDSASNITISFEAAAAAARDDKAAVFRREDHPHQPKAVTVAQEQQAAADWG
                ***.*** **          **  :  :. *  :.:      : . **  :* : :.*  

AT2G16720.1     QNKYIRNGLVCKEERVVVEEKIGPDLNLELRISPPWQNQ--------REISTCTASRFYM
Os034636_Os09t0 HGKPLK----C------------PDLNLDLCISLPSQEEPMMMKPVKRETGVCFSCSLGL
                :.* ::    *            *****:* ** * *::        ** ..* :. : :

AT2G16720.1     ENDMECSSETVKCQTENSSSISYSSIDISSSNVGYDFLGLKTRILDFRSLEMK
Os034636_Os09t0 PKSTDC-----KCSS---------------------FLGLRTAMLDFRSLEMK
                 :. :*     **.:                     ****:* :*********
BoxShade v3.31 C (beta, 970507) Output
AT2G16720.1     M G R S P C C E K E H M N K G A W T K E E D E R L V S Y I K S H G E G C W R S L P R A A G L L R C G K S C R L R W I N Y
Os034636_Os09t0    M G R S P C C E K A H T N K G A W T K E E D D R L I A Y I K A H G E G C W R S L P K A A G L L R C G K S C R L R W I N Y
 
AT2G16720.1     L R P D L K R G N F T H D E D E L I I K L H S L L G N K W S L I A A R L P G R T D N E I K N Y W N T H I K R K L L S K G
Os034636_Os09t0    L R P D L K R G N F T E E E D E L I I K L H S L L G N K W S L I A G R L P G R T D N E I K N Y W N T H I R R K L L S R G
 
AT2G16720.1     I D P A T H R G I N - - - - - - - - - - E A K I S D L K K T K D Q I V K - - - - - - D V S F V T K F E E T D K S G D Q K
Os034636_Os09t0    I D P V T H R P I N D S A S N I T I S F E A A A A A A R D D K A A V F R R E D H P H Q P K A V T V A Q E Q Q A A A D W G
 
AT2G16720.1     Q N K Y I R N G L V C K E E R V V V E E K I G P D L N L E L R I S P P W Q N Q - - - - - - - - R E I S T C T A S R F Y M
Os034636_Os09t0    H G K P L K - - - - C - - - - - - - - - - - - P D L N L D L C I S L P S Q E E P M M M K P V K R E T G V C F S C S L G L
 
AT2G16720.1     E N D M E C S S E T V K C Q T E N S S S I S Y S S I D I S S S N V G Y D F L G L K T R I L D F R S L E M K
Os034636_Os09t0    P K S T D C - - - - - K C S S - - - - - - - - - - - - - - - - - - - - - F L G L R T A M L D F R S L E M K
 
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