fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G16720.1 EKIGPDLNLELRISPP at 188/269 in AT2G16720.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm032581 LERCPDLNLELTISPP in 173/253 AT4G34990.1 1st_not 0.587649402 II
Gm019768 not found in 289aa AT2G16720.1 not_1st 0.420318725 II
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G16720.1     MGRSPCCEKEHMN-KGAWTKEEDERLVSYIKSHGEGCWRSLPRAAGLLRCGKSCRLRWIN
gm019768_Glyma0 MGRTPCSDKEQINKKGPWSKEEDELLINYINLHGQGNWKSIPKAAGLLRCGKSCRLRWTN
gm032581_Glyma1 MGRSPCCEKAHTN-KGAWTKEEDDRLISYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWIN
                ***:**.:* : * **.*:****: *:.**. **:* *:*:*:*************** *

AT2G16720.1     YLRPDLKRGNFTHDEDELIIKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHIKRKLLSK
gm019768_Glyma0 YLRPDLKKGNFTEEESNLIIHLHSLLGNKWSQIATSLPGRTDNEIKNYWKSHLKRYLYAL
gm032581_Glyma1 YLRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLLNR
                *******:****.:*.:***:********** **  *************::*::* *   

AT2G16720.1     GIDPATHRGINEAKISD------LKKTKDQIVKDVSFVTKF--------EETDKSGDQKQ
gm019768_Glyma0 GIDPVTHKPFKEDTNTTSTPPNNSMATTTSTIPRIYYFNVFLNSKVHISADDDYSADGGA
gm032581_Glyma1 GIDPATHRPLNEAASA---------ATVTTATTNISF-----------------GKQQEQ
                ****.**: ::*   :          *       : :                 . :   

AT2G16720.1     NKYIRNGLVCKE---ERVVVEEKIGPDLNLELRISPPWQNQREIS---------------
gm019768_Glyma0 DSNSSSGVTIEEAS-----------PQVNLELSIAPPSQPHEDAASSNKKCMFCQQQMGM
gm032581_Glyma1 ETSSSNGSVVKGSILERC-------PDLNLELTISPPRQQQPQKN---------------
                :.   .* . :              *::**** *:** * : :                 

AT2G16720.1     -------TCTASRFYMENDMECSSETVKCQTENSSSISYSSIDISS----SNVGYDFLGL
gm019768_Glyma0 LISESMCVCLWCNVGMQINPTCC-----CKAKGFVTATIVTPPISNNDVCPFLNFQMILV
gm032581_Glyma1 -------LCFVCSLGLNNSKDCS-----CNVANTVTVTVSNTTPSSAAAAAAAAYDFLGM
                        *  . . :: .  *.     *:. .  : :  .   *.    .   :::: :

AT2G16720.1     KTR-ILDFRSLEMK
gm019768_Glyma0 S---IMNC------
gm032581_Glyma1 KTNGVWDCTRLEMK
                .   : :
BoxShade v3.31 C (beta, 970507) Output
AT2G16720.1     M G R S P C C E K E H M N - K G A W T K E E D E R L V S Y I K S H G E G C W R S L P R A A G L L R C G K S C R L R W I N
gm019768_Glyma0    M G R T P C S D K E Q I N K K G P W S K E E D E L L I N Y I N L H G Q G N W K S I P K A A G L L R C G K S C R L R W T N
gm032581_Glyma1    M G R S P C C E K A H T N - K G A W T K E E D D R L I S Y I R A H G E G C W R S L P K A A G L L R C G K S C R L R W I N
 
AT2G16720.1     Y L R P D L K R G N F T H D E D E L I I K L H S L L G N K W S L I A A R L P G R T D N E I K N Y W N T H I K R K L L S K
gm019768_Glyma0    Y L R P D L K K G N F T E E E S N L I I H L H S L L G N K W S Q I A T S L P G R T D N E I K N Y W K S H L K R Y L Y A L
gm032581_Glyma1    Y L R P D L K R G N F T E E E D E L I I K L H S L L G N K W S L I A G R L P G R T D N E I K N Y W N T H I R R K L L N R
 
AT2G16720.1     G I D P A T H R G I N E A K I S D - - - - - - L K K T K D Q I V K D V S F V T K F - - - - - - - - E E T D K S G D Q K Q
gm019768_Glyma0    G I D P V T H K P F K E D T N T T S T P P N N S M A T T T S T I P R I Y Y F N V F L N S K V H I S A D D D Y S A D G G A
gm032581_Glyma1    G I D P A T H R P L N E A A S A - - - - - - - - - A T V T T A T T N I S F - - - - - - - - - - - - - - - - - G K Q Q E Q
 
AT2G16720.1     N K Y I R N G L V C K E - - - E R V V V E E K I G P D L N L E L R I S P P W Q N Q R E I S - - - - - - - - - - - - - - -
gm019768_Glyma0    D S N S S S G V T I E E A S - - - - - - - - - - - P Q V N L E L S I A P P S Q P H E D A A S S N K K C M F C Q Q Q M G M
gm032581_Glyma1    E T S S S N G S V V K G S I L E R C - - - - - - - P D L N L E L T I S P P R Q Q Q P Q K N - - - - - - - - - - - - - - -
 
AT2G16720.1     - - - - - - - T C T A S R F Y M E N D M E C S S E T V K C Q T E N S S S I S Y S S I D I S S - - - - S N V G Y D F L G L
gm019768_Glyma0    L I S E S M C V C L W C N V G M Q I N P T C C - - - - - C K A K G F V T A T I V T P P I S N N D V C P F L N F Q M I L V
gm032581_Glyma1    - - - - - - - L C F V C S L G L N N S K D C S - - - - - C N V A N T V T V T V S N T T P S S A A A A A A A A Y D F L G M
 
AT2G16720.1     K T R - I L D F R S L E M K
gm019768_Glyma0    S - - - I M N C - - - - - -
gm032581_Glyma1    K T N G V W D C T R L E M K
 
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