fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G16770.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp035914 not found in 290aa AT2G16770.1 1st_1st 0.361111111 Ib
Sm010232 not found in 282aa AT2G16770.1 1st_1st 0.361111111 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G16770.1     -------------------------------MDDGELEFSN-------SNMGGELPSC--
Sm010232_Selmo1 -------------------------------MDDGEVDFSDHDIFCGASNLVCD-----D
pp035914_Pp1s34 MACRRRMDSPPMLCKTSADNPEGVIRGRGYQMDDGELEFTDHDVFAGCS--LCDLPSTPT
                                               *****::*::       *    :      

AT2G16770.1     ---SMDSFFDELLRDSHACTHTHTCNPPGPENTHTHTCLHVHTKIL--PDKVSTDDTSE-
Sm010232_Selmo1 DHSAMESFLDEILKSTHTCTHTHTCNPPGPDKTHTHTCFHTHTQLFASPEEGSSHQKEEE
pp035914_Pp1s34 TMGSMENFLEEVLRSTHACTHTHTCNPPGPDNTHTHTCYHTHTHLFAAGEEDTSADKSE-
                   :*:.*::*:*:.:*:************::****** *.**:::   :: :: :..* 

AT2G16770.1     -----------------------------SSGKKRPLGNREAVRKYREKKKAKAASLEDE
Sm010232_Selmo1 DHHRPGSEALGPGSIATAATTATTAAAAPQSSKKRPLGNREAVRKYREKKKAHAAYLEEQ
pp035914_Pp1s34 --------------------TPTSS----HNSKKRPLGNREAVRKYREKKKAHTAYLEEQ
                                              ..********************::* **::

AT2G16770.1     VMRLKAVNNQLLKRLQGQAALEAEVTRLKCLLVDIRGRIDGEIGAFPYQ-KPAVTNVPYS
Sm010232_Selmo1 VAQLKALNQQLVKRLQGQAALEAEVARLRALLSEFRGRIDAELGCFPFK-RPCSTNG---
pp035914_Pp1s34 VHHLRGLNQQLVKRLQGQASLESEVIRLRSLLSEFRGRIDAEIGSFPVQASKCPT-----
                * :*:.:*:**:*******:**:** **:.** ::*****.*:*.** :   . *     

AT2G16770.1     YMMHPCNMQCDVDNLYCLQNGNNGEGASM--NEQGLNG--CEFDQLECLANQNLAGKEIP
Sm010232_Selmo1 ------------------RGGGGGGGAAA-------NGDECS-PQLQALSGGFYLNSVSV
pp035914_Pp1s34 --------------------------SSALVTKSLPNGD-C---EVQSLSGGFCVNTVTV
                                          ::        **  *   :::.*:.    ..   

AT2G16770.1     VCSNGIGTFTVNGSGVN------KRKGEPRAAKAV------------------------
Sm010232_Selmo1 PCDADVPCFH----GDS-------TSSQPQLHGGKGAIACDYVSESCQGTLGDSEGGIQ
pp035914_Pp1s34 PCVTDVPCLHTATSGNSLARPPMTPSSEPAKWNRNSPMSDCVLSDSTVMHLS-------
                 *  .:  :     * .        ..:*
BoxShade v3.31 C (beta, 970507) Output
AT2G16770.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M D D G E L E F S N - - - - - - - S N M G G E L P S C - -
Sm010232_Selmo1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M D D G E V D F S D H D I F C G A S N L V C D - - - - - D
pp035914_Pp1s34    M A C R R R M D S P P M L C K T S A D N P E G V I R G R G Y Q M D D G E L E F T D H D V F A G C S - - L C D L P S T P T
 
AT2G16770.1     - - - S M D S F F D E L L R D S H A C T H T H T C N P P G P E N T H T H T C L H V H T K I L - - P D K V S T D D T S E -
Sm010232_Selmo1    D H S A M E S F L D E I L K S T H T C T H T H T C N P P G P D K T H T H T C F H T H T Q L F A S P E E G S S H Q K E E E
pp035914_Pp1s34    T M G S M E N F L E E V L R S T H A C T H T H T C N P P G P D N T H T H T C Y H T H T H L F A A G E E D T S A D K S E -
 
AT2G16770.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - S S G K K R P L G N R E A V R K Y R E K K K A K A A S L E D E
Sm010232_Selmo1    D H H R P G S E A L G P G S I A T A A T T A T T A A A A P Q S S K K R P L G N R E A V R K Y R E K K K A H A A Y L E E Q
pp035914_Pp1s34    - - - - - - - - - - - - - - - - - - - - T P T S S - - - - H N S K K R P L G N R E A V R K Y R E K K K A H T A Y L E E Q
 
AT2G16770.1     V M R L K A V N N Q L L K R L Q G Q A A L E A E V T R L K C L L V D I R G R I D G E I G A F P Y Q - K P A V T N V P Y S
Sm010232_Selmo1    V A Q L K A L N Q Q L V K R L Q G Q A A L E A E V A R L R A L L S E F R G R I D A E L G C F P F K - R P C S T N G - - -
pp035914_Pp1s34    V H H L R G L N Q Q L V K R L Q G Q A S L E S E V I R L R S L L S E F R G R I D A E I G S F P V Q A S K C P T - - - - -
 
AT2G16770.1     Y M M H P C N M Q C D V D N L Y C L Q N G N N G E G A S M - - N E Q G L N G - - C E F D Q L E C L A N Q N L A G K E I P
Sm010232_Selmo1    - - - - - - - - - - - - - - - - - - R G G G G G G G A A A - - - - - - - N G D E C S - P Q L Q A L S G G F Y L N S V S V
pp035914_Pp1s34    - - - - - - - - - - - - - - - - - - - - - - - - - - S S A L V T K S L P N G D - C - - - E V Q S L S G G F C V N T V T V
 
AT2G16770.1     V C S N G I G T F T V N G S G V N - - - - - - K R K G E P R A A K A V - - - - - - - - - - - - - - - - - - - - - - - -
Sm010232_Selmo1    P C D A D V P C F H - - - - G D S - - - - - - - T S S Q P Q L H G G K G A I A C D Y V S E S C Q G T L G D S E G G I Q
pp035914_Pp1s34    P C V T D V P C L H T A T S G N S L A R P P M T P S S E P A K W N R N S P M S D C V L S D S T V M H L S - - - - - - -
 
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