fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G16770.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt021685 not found in 267aa AT4G35040.1 1st_not 0.571428571 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (1 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G16770.1     MDDGELEFSNS------NMGGELPSCSMDSFFDELLRDS-HACTHTHTCNPPGPENTHTH
pt021685_POPTR_ MDDGELDYSNQELFLSPNM-DDLPSSCSYGFLDELLMDTPHACTHTHTCNPPGPDNPHTH
                ******::**.      ** .:***..  .*:**** *: **************:*.***

AT2G16770.1     TCLHVHTKILP---DKVSTDDTSES---SGKKRPLGNREAVRKYREKKKAKAASLEDEVM
pt021685_POPTR_ VCFHAHTKLLSSSEDKVESEDTAESIEKKSKKRPLGNREAVRKYREKKKAKAASLEDEVK
                .*:*.***:*.   ***.::**:**   ..***************************** 

AT2G16770.1     RLKAVNNQLLKRLQGQAALEAEVTRLKCLLVDIRGRIDGEIGAFPYQKPA----VTNVPY
pt021685_POPTR_ RLRALNQQLLKRLQGQAALEAEVARLKCLLVDIRGRIEGEIGSFPYQKSANNVNLTNFPG
                **:*:*:****************:*************:****:*****.*    :**.* 

AT2G16770.1     SYMMHPCNMQCDVDNLYCLQ---NGNNGEGASMNEQGLNGCEFDQLECLANQNLAGKEIP
pt021685_POPTR_ SLVMNPCNIRCD-DQVYCQHPGLDGKGGEGEALKGQGFNSCEFENLQCMEYQNSGMRDLP
                * :*:***::** *::** :   :*:.*** ::: **:*.***::*:*:  ** . :::*

AT2G16770.1     VCSNGIGTFTVNGSGVNKRKGEPRAAKAV--
pt021685_POPTR_ GCSIGNEEMNGNSSSANKRKGG--ACEATVS
                 ** *   :. *.*..*****   *.:*.
BoxShade v3.31 C (beta, 970507) Output
AT2G16770.1     M D D G E L E F S N S - - - - - - N M G G E L P S C S M D S F F D E L L R D S - H A C T H T H T C N P P G P E N T H T H
pt021685_POPTR_    M D D G E L D Y S N Q E L F L S P N M - D D L P S S C S Y G F L D E L L M D T P H A C T H T H T C N P P G P D N P H T H
 
AT2G16770.1     T C L H V H T K I L P - - - D K V S T D D T S E S - - - S G K K R P L G N R E A V R K Y R E K K K A K A A S L E D E V M
pt021685_POPTR_    V C F H A H T K L L S S S E D K V E S E D T A E S I E K K S K K R P L G N R E A V R K Y R E K K K A K A A S L E D E V K
 
AT2G16770.1     R L K A V N N Q L L K R L Q G Q A A L E A E V T R L K C L L V D I R G R I D G E I G A F P Y Q K P A - - - - V T N V P Y
pt021685_POPTR_    R L R A L N Q Q L L K R L Q G Q A A L E A E V A R L K C L L V D I R G R I E G E I G S F P Y Q K S A N N V N L T N F P G
 
AT2G16770.1     S Y M M H P C N M Q C D V D N L Y C L Q - - - N G N N G E G A S M N E Q G L N G C E F D Q L E C L A N Q N L A G K E I P
pt021685_POPTR_    S L V M N P C N I R C D - D Q V Y C Q H P G L D G K G G E G E A L K G Q G F N S C E F E N L Q C M E Y Q N S G M R D L P
 
AT2G16770.1     V C S N G I G T F T V N G S G V N K R K G E P R A A K A V - -
pt021685_POPTR_    G C S I G N E E M N G N S S S A N K R K G G - - A C E A T V S
 
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