fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G16770.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb034380 not found in 481aa AT4G35040.1 1st_not 0.428571428 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G16770.1     MDDGELEFSNSNMGGELPSCSMDSFFDELLRDSHACTHTHTCNPPGPENTHTHTCLHVHT
Sb034380_Sorbi1 -------LSGSRL---VTSNALDT------RDITGALSQHLTTDSA---LHPRVAIHL--
                       :*.*.:   :.* ::*:      **  ..   *  . ..    *.:..:*:  

AT2G16770.1     KILPDKV----------STDDTSESSGK-------KRPLGNREAVRKYREKKKAKAASLE
Sb034380_Sorbi1 -ILASEIAGVGNLGGAGTTEEASLVNTRHEVDVLDRRPLIGKGANLPLDPAPDVDEQAAE
                 **..::          :*:::*  . :       :*** .: *        ...  : *

AT2G16770.1     DEVMRLK----------------AVNNQLLKR----------------------LQGQAA
Sb034380_Sorbi1 PGHLRLERGVALELLHELLVERPEVDHLLLERRGVGLLLLPVLPDGGAVPRGALLGGGVA
                   :**:                 *:: **:*                      * * .*

AT2G16770.1     LEA---------------------------------EVTRLKCLLVDIRGRI--------
Sb034380_Sorbi1 VTGGVGVVLGRRLGGVVAGRGGDDLGVDVDAGVGVREVVHGRVAGVGVRARVVLRVLEDL
                : .                                 **.: :   *.:*.*:        

AT2G16770.1     ---------DGEIGAFPYQKPAVTNVPYSYMMHPCNMQCDVDNLYCLQNGNNGEGASMNE
Sb034380_Sorbi1 VEVAVHGAAAGRVGA---ERRAQVRVRVGEIQVPVVHCC------CKKAG----GRALGS
                          *.:**   :: * ..*  . :  *    *      * : *    * ::..

AT2G16770.1     QGLNGCEFDQLECLANQNLAGKEIPVCSNGIGTFTVN-GSGVNKRKGEP-RAAKAV----
Sb034380_Sorbi1 QGL------------------IHLPAGAAGEGQSKPRMGGGCDDEKGEKGRSGRRRRGRG
                ***                   .:*. : * *  . . *.* :..***  *:.:      

AT2G16770.1     --
Sb034380_Sorbi1 GG
BoxShade v3.31 C (beta, 970507) Output
AT2G16770.1     M D D G E L E F S N S N M G G E L P S C S M D S F F D E L L R D S H A C T H T H T C N P P G P E N T H T H T C L H V H T
Sb034380_Sorbi1    - - - - - - - L S G S R L - - - V T S N A L D T - - - - - - R D I T G A L S Q H L T T D S A - - - L H P R V A I H L - -
 
AT2G16770.1     K I L P D K V - - - - - - - - - - S T D D T S E S S G K - - - - - - - K R P L G N R E A V R K Y R E K K K A K A A S L E
Sb034380_Sorbi1    - I L A S E I A G V G N L G G A G T T E E A S L V N T R H E V D V L D R R P L I G K G A N L P L D P A P D V D E Q A A E
 
AT2G16770.1     D E V M R L K - - - - - - - - - - - - - - - - A V N N Q L L K R - - - - - - - - - - - - - - - - - - - - - - L Q G Q A A
Sb034380_Sorbi1    P G H L R L E R G V A L E L L H E L L V E R P E V D H L L L E R R G V G L L L L P V L P D G G A V P R G A L L G G G V A
 
AT2G16770.1     L E A - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - E V T R L K C L L V D I R G R I - - - - - - - -
Sb034380_Sorbi1    V T G G V G V V L G R R L G G V V A G R G G D D L G V D V D A G V G V R E V V H G R V A G V G V R A R V V L R V L E D L
 
AT2G16770.1     - - - - - - - - - D G E I G A F P Y Q K P A V T N V P Y S Y M M H P C N M Q C D V D N L Y C L Q N G N N G E G A S M N E
Sb034380_Sorbi1    V E V A V H G A A A G R V G A - - - E R R A Q V R V R V G E I Q V P V V H C C - - - - - - C K K A G - - - - G R A L G S
 
AT2G16770.1     Q G L N G C E F D Q L E C L A N Q N L A G K E I P V C S N G I G T F T V N - G S G V N K R K G E P - R A A K A V - - - -
Sb034380_Sorbi1    Q G L - - - - - - - - - - - - - - - - - - I H L P A G A A G E G Q S K P R M G G G C D D E K G E K G R S G R R R R G R G
 
AT2G16770.1     - -
Sb034380_Sorbi1    G G
 
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