fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G17040.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt019413 not found in 278aa AT2G17040.1 not_1st 0.566666666 II
Pt000953 not found in 253aa AT2G17040.1 not_1st 0.435087719 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G17040.1     ---MGKDIE-LPGFRFHPTEEELLDFYLKNMVYGKRSSVEVIGFLNIYRHDPWDLPGLSR
pt000953_POPTR_ -----MEFDGLPGFRFHPTEEELLDFYLTKTVLGQDTA-DIIGFLNIYNHEPWDLPGLSK
pt019413_POPTR_ MDEMPLQLD-LPGFRFHPTEEELLDFYLKNMVFGRKMRLDVIGYLNIYRHDPSELPGLSK
                      ::: ******************.: * *:    ::**:****.*:* :*****:

AT2G17040.1     IGEREWYFFVPRERKHGNGGRPSRTTEKGYWKATGSDRKIISLSEPKRVIGLKKTLVFYR
pt000953_POPTR_ IGEREWYFLVHRESVL---GRPRRTTEKGYWKATGSDRPIRCLMDPKRLLGHRKTMVFYR
pt019413_POPTR_ VGEREWYFFVPRDRKHGNGGRPNRTTQNGFWKATGSDRKIVSLSDPKRMIGFRKTLVFYK
                :*******:* *:      *** ***::*:******** * .* :***::* :**:***:

AT2G17040.1     GRAPGGSKTDWVMNEFRMPDNCS-LPKDVVLCKIYRKATSLKVLEQRAEMEAKMNQTCPN
pt000953_POPTR_ GRAPRGSKTDWVMNEYRLPSNCY-LSKEIVLCKVYRKATSLKVLEQRAAIEEIV-----R
pt019413_POPTR_ GRAPRGSKTDWVMNEYRLPEYSSPLPKDIVLCKIYRKATSLKVLEQRAAMEEEM-KTIHA
                **** **********:*:*. .  *.*::****:************** :*  :      

AT2G17040.1     SPLSSS------ETISFVGKEENMMTSFRAPQVIAMEEANKIQMHQENAKTEEKQREAET
pt000953_POPTR_ APNVTSLSPPMQENFSFY----DPQKSFNKFLLEQNNVVHKVE-GVTVIEEEEDN---KI
pt019413_POPTR_ SPSSSSL-----DTMSFCSQPEDPV----PPELPTQHLVFKKEIEDDIIRYEKPR---EI
                :*  :*      :.:**     :         :   . . * :      . *: .   : 

AT2G17040.1     KEPSSSLKLPFGS----LPELQLP-KPGVEWDQ--LLSI-SPWLQNLTPIVNIYW-
pt000953_POPTR_ GYP--SQIMGVGPIKEHFSELLSP-KLVLDWTMD------SLWPN-----------
pt019413_POPTR_ KGP--SLQLPMGTDK--LPELQVPSKLSMEWNQDPIWSLNSPWLQNLIPYADILNF
                  *  *  : .*.    :.**  * *  ::*         * * :
BoxShade v3.31 C (beta, 970507) Output
AT2G17040.1     - - - M G K D I E - L P G F R F H P T E E E L L D F Y L K N M V Y G K R S S V E V I G F L N I Y R H D P W D L P G L S R
pt000953_POPTR_    - - - - - M E F D G L P G F R F H P T E E E L L D F Y L T K T V L G Q D T A - D I I G F L N I Y N H E P W D L P G L S K
pt019413_POPTR_    M D E M P L Q L D - L P G F R F H P T E E E L L D F Y L K N M V F G R K M R L D V I G Y L N I Y R H D P S E L P G L S K
 
AT2G17040.1     I G E R E W Y F F V P R E R K H G N G G R P S R T T E K G Y W K A T G S D R K I I S L S E P K R V I G L K K T L V F Y R
pt000953_POPTR_    I G E R E W Y F L V H R E S V L - - - G R P R R T T E K G Y W K A T G S D R P I R C L M D P K R L L G H R K T M V F Y R
pt019413_POPTR_    V G E R E W Y F F V P R D R K H G N G G R P N R T T Q N G F W K A T G S D R K I V S L S D P K R M I G F R K T L V F Y K
 
AT2G17040.1     G R A P G G S K T D W V M N E F R M P D N C S - L P K D V V L C K I Y R K A T S L K V L E Q R A E M E A K M N Q T C P N
pt000953_POPTR_    G R A P R G S K T D W V M N E Y R L P S N C Y - L S K E I V L C K V Y R K A T S L K V L E Q R A A I E E I V - - - - - R
pt019413_POPTR_    G R A P R G S K T D W V M N E Y R L P E Y S S P L P K D I V L C K I Y R K A T S L K V L E Q R A A M E E E M - K T I H A
 
AT2G17040.1     S P L S S S - - - - - - E T I S F V G K E E N M M T S F R A P Q V I A M E E A N K I Q M H Q E N A K T E E K Q R E A E T
pt000953_POPTR_    A P N V T S L S P P M Q E N F S F Y - - - - D P Q K S F N K F L L E Q N N V V H K V E - G V T V I E E E E D N - - - K I
pt019413_POPTR_    S P S S S S L - - - - - D T M S F C S Q P E D P V - - - - P P E L P T Q H L V F K K E I E D D I I R Y E K P R - - - E I
 
AT2G17040.1     K E P S S S L K L P F G S - - - - L P E L Q L P - K P G V E W D Q - - L L S I - S P W L Q N L T P I V N I Y W -
pt000953_POPTR_    G Y P - - S Q I M G V G P I K E H F S E L L S P - K L V L D W T M D - - - - - - S L W P N - - - - - - - - - - -
pt019413_POPTR_    K G P - - S L Q L P M G T D K - - L P E L Q V P S K L S M E W N Q D P I W S L N S P W L Q N L I P Y A D I L N F
 
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