fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G17040.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt021969 MAEMALKLDLPGFRF in 5/284 AT2G17040.1 1st_1st 0.571929824 Ia
Pt019413 not found in 278aa AT2G17040.1 not_1st 0.566666666 II
Pt000953 not found in 253aa AT2G17040.1 not_1st 0.435087719 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G17040.1     ---MGKDIE-LPGFRFHPTEEELLDFYLKNMVYGKRSSVEVIGFLNIYRHDPWDLPGLSR
pt019413_POPTR_ MDEMPLQLD-LPGFRFHPTEEELLDFYLKNMVFGRKMRLDVIGYLNIYRHDPSELPGLSK
pt000953_POPTR_ -----MEFDGLPGFRFHPTEEELLDFYLTKTVLGQDTA-DIIGFLNIYNHEPWDLPGLSK
pt021969_POPTR_ MAEMALKLD-LPGFRFHPTEEELLDFYLKNIVFGKKMRLDVIGYLNIYRHDPWDLPGLSN
                      .:: ******************.: * *:    ::**:****.*:* :*****.

AT2G17040.1     IGEREWYFFVPRERKHGNGGRPSRTTEKGYWKATGSDRKIISLSEPKRVIGLKKTLVFYR
pt019413_POPTR_ VGEREWYFFVPRDRKHGNGGRPNRTTQNGFWKATGSDRKIVSLSDPKRMIGFRKTLVFYK
pt000953_POPTR_ IGEREWYFLVHRESVL---GRPRRTTEKGYWKATGSDRPIRCLMDPKRLLGHRKTMVFYR
pt021969_POPTR_ VGEREWYFFVPRDRKHGSGGRPNRTTQNGFWKATGSDRKIVSLSDPKRMIGLRKTLVFYK
                :*******:* *:      *** ***::*:******** * .* :***::* :**:***:

AT2G17040.1     GRAPGGSKTDWVMNEFRMPD-NCSLPKDVVLCKIYRKATSLKVLEQRAEMEAKMN--QTC
pt019413_POPTR_ GRAPRGSKTDWVMNEYRLPEYSSPLPKDIVLCKIYRKATSLKVLEQRAAMEEEMKTIHAS
pt000953_POPTR_ GRAPRGSKTDWVMNEYRLPS-NCYLSKEIVLCKVYRKATSLKVLEQRAAIEEIVR----A
pt021969_POPTR_ GRAPRGNKTDWVMNEYRLPEYSCPLPKDIVLCKIYRKATSLKVLEQRAAMEEEMKTIHAS
                **** *.********:*:*. .. *.*::****:************** :*  :.    .

AT2G17040.1     PNS-----PLSSSETISFVGKEENMMTSFRAPQV-IAMEEANKIQMHQENAKTEEKQREA
pt019413_POPTR_ PSS-------SSLDTMSFCSQPEDPV----PPEL-PTQHLVFKKEIED-DIIRYEKPR--
pt000953_POPTR_ PNVTSLSPPMQ--ENFSFY----DPQKSFNKFLL-EQNNVVHKVE----GVTVIEEEEDN
pt021969_POPTR_ PSSS---PPPSSLDTMSFCSQLEDPV----PPILMPAQNLVFKKEIEDNNNNRYEKPN--
                *.        .  :.:**     :         :    . . * :    .    *: .  

AT2G17040.1     ETKEPSSSLKLPFGS----LPELQLP-KPGVEWDQ--LLSI-SPWLQNLTPIVNIYW-
pt019413_POPTR_ EIKGP--SLQLPMGT--DKLPELQVPSKLSMEWNQDPIWSLNSPWLQNLIPYADILNF
pt000953_POPTR_ KIGYP--SQIMGVGPIKEHFSELLSP-KLVLDWTMD------SLWPN-----------
pt021969_POPTR_ EIKRP--SLHLPMGK--DMLPELQVPSKLSMEWNQDPIWSLNSPWIQNFAHYADILNF
                :   *  *  : .*     :.**  * *  ::*         * * :
BoxShade v3.31 C (beta, 970507) Output
AT2G17040.1     - - - M G K D I E - L P G F R F H P T E E E L L D F Y L K N M V Y G K R S S V E V I G F L N I Y R H D P W D L P G L S R
pt019413_POPTR_    M D E M P L Q L D - L P G F R F H P T E E E L L D F Y L K N M V F G R K M R L D V I G Y L N I Y R H D P S E L P G L S K
pt000953_POPTR_    - - - - - M E F D G L P G F R F H P T E E E L L D F Y L T K T V L G Q D T A - D I I G F L N I Y N H E P W D L P G L S K
pt021969_POPTR_    M A E M A L K L D - L P G F R F H P T E E E L L D F Y L K N I V F G K K M R L D V I G Y L N I Y R H D P W D L P G L S N
 
AT2G17040.1     I G E R E W Y F F V P R E R K H G N G G R P S R T T E K G Y W K A T G S D R K I I S L S E P K R V I G L K K T L V F Y R
pt019413_POPTR_    V G E R E W Y F F V P R D R K H G N G G R P N R T T Q N G F W K A T G S D R K I V S L S D P K R M I G F R K T L V F Y K
pt000953_POPTR_    I G E R E W Y F L V H R E S V L - - - G R P R R T T E K G Y W K A T G S D R P I R C L M D P K R L L G H R K T M V F Y R
pt021969_POPTR_    V G E R E W Y F F V P R D R K H G S G G R P N R T T Q N G F W K A T G S D R K I V S L S D P K R M I G L R K T L V F Y K
 
AT2G17040.1     G R A P G G S K T D W V M N E F R M P D - N C S L P K D V V L C K I Y R K A T S L K V L E Q R A E M E A K M N - - Q T C
pt019413_POPTR_    G R A P R G S K T D W V M N E Y R L P E Y S S P L P K D I V L C K I Y R K A T S L K V L E Q R A A M E E E M K T I H A S
pt000953_POPTR_    G R A P R G S K T D W V M N E Y R L P S - N C Y L S K E I V L C K V Y R K A T S L K V L E Q R A A I E E I V R - - - - A
pt021969_POPTR_    G R A P R G N K T D W V M N E Y R L P E Y S C P L P K D I V L C K I Y R K A T S L K V L E Q R A A M E E E M K T I H A S
 
AT2G17040.1     P N S - - - - - P L S S S E T I S F V G K E E N M M T S F R A P Q V - I A M E E A N K I Q M H Q E N A K T E E K Q R E A
pt019413_POPTR_    P S S - - - - - - - S S L D T M S F C S Q P E D P V - - - - P P E L - P T Q H L V F K K E I E D - D I I R Y E K P R - -
pt000953_POPTR_    P N V T S L S P P M Q - - E N F S F Y - - - - D P Q K S F N K F L L - E Q N N V V H K V E - - - - G V T V I E E E E D N
pt021969_POPTR_    P S S S - - - P P P S S L D T M S F C S Q L E D P V - - - - P P I L M P A Q N L V F K K E I E D N N N N R Y E K P N - -
 
AT2G17040.1     E T K E P S S S L K L P F G S - - - - L P E L Q L P - K P G V E W D Q - - L L S I - S P W L Q N L T P I V N I Y W -
pt019413_POPTR_    E I K G P - - S L Q L P M G T - - D K L P E L Q V P S K L S M E W N Q D P I W S L N S P W L Q N L I P Y A D I L N F
pt000953_POPTR_    K I G Y P - - S Q I M G V G P I K E H F S E L L S P - K L V L D W T M D - - - - - - S L W P N - - - - - - - - - - -
pt021969_POPTR_    E I K R P - - S L H L P M G K - - D M L P E L Q V P S K L S M E W N Q D P I W S L N S P W I Q N F A H Y A D I L N F
 
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