fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G17040.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb034405 not found in 387aa AT2G17040.1 not_1st 0.433333333 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G17040.1     --------------------------------------MGKDIELPGFRFHPTEEELLDF
Sb034405_Sorbi1 GSQQQPAAHLHHRSIKQQQPAAARESNQRQSMSSSGGAGAAELELPGFRFHPTEEELLEF
                                                       . ::***************:*

AT2G17040.1     YLKNMVYGKRSSVEVIGFLNIYRHDPWDLPGLSRIGEREWYFFVPRE--------RKH--
Sb034405_Sorbi1 YLKQVAYGRKLKFDIIPTVHLYRHDPWELPGLTRIGEREWYFFVPRDGGGGSRAAKQHQS
                ***::.**:: ..::*  :::******:****:*************:        ::*  

AT2G17040.1     --GNGGRPSRTTEKGYWKATGSDRKIISLSEPKRVIGLKKTLVFYRGRAPGGSKTDWVMN
Sb034405_Sorbi1 GSGGGGRPSRTTERGFWKATGSDRAVRCAADPKRLIGLKKTLVYYEGRAPRGTKTDWVMN
                  *.*********:*:******** : . ::***:********:*.**** *:*******

AT2G17040.1     EFRMPD-----------------NCSLPKDVVLCKIYRKATSLKVLEQRAEMEAKMNQTC
Sb034405_Sorbi1 EYRLPDATCCNAAGGDSSAASSTNKSPKEDIVLCKIYRKAVSLKELEQRVAMEELARATA
                *:*:**                 * *  :*:*********.*** ****. **   . *.

AT2G17040.1     PNSPLSSSETISFVGKEENMMTSFRAPQVIAMEEANKIQMHQEN------------AKTE
Sb034405_Sorbi1 --TPSASHSTGS---PADSMSSSDHETAAAAVDHHSQKQQGVETMTMMPVGILPPPVMSM
                  :* :* .* *     :.* :* : . . *::. .: *   *.            . : 

AT2G17040.1     EKQREAETKEPSSSLKLPFG-SLPELQLPKPGVEW--DQLLSI--SPWLQNLTP----IV
Sb034405_Sorbi1 KKEEVAEPLLPAAALMKPATLSLPQLEVAKQQ-EWMQDPFLTQLRSPWMESWSPYYASVL
                :*:. **.  *:::*  *   ***:*::.*   **  * :*:   ***::. :*    ::

AT2G17040.1     NIYW
Sb034405_Sorbi1 NF--
                *:
BoxShade v3.31 C (beta, 970507) Output
AT2G17040.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M G K D I E L P G F R F H P T E E E L L D F
Sb034405_Sorbi1    G S Q Q Q P A A H L H H R S I K Q Q Q P A A A R E S N Q R Q S M S S S G G A G A A E L E L P G F R F H P T E E E L L E F
 
AT2G17040.1     Y L K N M V Y G K R S S V E V I G F L N I Y R H D P W D L P G L S R I G E R E W Y F F V P R E - - - - - - - - R K H - -
Sb034405_Sorbi1    Y L K Q V A Y G R K L K F D I I P T V H L Y R H D P W E L P G L T R I G E R E W Y F F V P R D G G G G S R A A K Q H Q S
 
AT2G17040.1     - - G N G G R P S R T T E K G Y W K A T G S D R K I I S L S E P K R V I G L K K T L V F Y R G R A P G G S K T D W V M N
Sb034405_Sorbi1    G S G G G G R P S R T T E R G F W K A T G S D R A V R C A A D P K R L I G L K K T L V Y Y E G R A P R G T K T D W V M N
 
AT2G17040.1     E F R M P D - - - - - - - - - - - - - - - - - N C S L P K D V V L C K I Y R K A T S L K V L E Q R A E M E A K M N Q T C
Sb034405_Sorbi1    E Y R L P D A T C C N A A G G D S S A A S S T N K S P K E D I V L C K I Y R K A V S L K E L E Q R V A M E E L A R A T A
 
AT2G17040.1     P N S P L S S S E T I S F V G K E E N M M T S F R A P Q V I A M E E A N K I Q M H Q E N - - - - - - - - - - - - A K T E
Sb034405_Sorbi1    - - T P S A S H S T G S - - - P A D S M S S S D H E T A A A A V D H H S Q K Q Q G V E T M T M M P V G I L P P P V M S M
 
AT2G17040.1     E K Q R E A E T K E P S S S L K L P F G - S L P E L Q L P K P G V E W - - D Q L L S I - - S P W L Q N L T P - - - - I V
Sb034405_Sorbi1    K K E E V A E P L L P A A A L M K P A T L S L P Q L E V A K Q Q - E W M Q D P F L T Q L R S P W M E S W S P Y Y A S V L
 
AT2G17040.1     N I Y W
Sb034405_Sorbi1    N F - -
 
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