fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G17040.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm030384 not found in 302aa AT2G17040.1 1st_1st 0.589473684 Ia
Gm032462 not found in 297aa AT2G17040.1 not_1st 0.584210526 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G17040.1     ------------MGKDIELPGFRFHPTEEELLDFYLKNMVYGKRSSVEVIGFLNIYRHDP
gm032462_Glyma1 ---MATMEDMNNMSGEITLPGFRFHPTEEELLDFYLKNMVVGKKLRYDVIGFLNIYQHDP
gm030384_Glyma1 MINMATMEDMSNMSGEITLPGFRFHPTEEELLDFYLKNMVVGKKLRYDVIGFLNIYQHDP
                            *. :* ********************** **:   :********:***

AT2G17040.1     WDLPGLSRIGEREWYFFVPRERKHGNGGRPSRTTEKGYWKATGSDRKIISLSEPKRVIGL
gm032462_Glyma1 WDLPGLAKVGEREWYFFVPRDKKHGSGGRPNRTTEKGFWKATGSDRKIVTLSDPKRIIGL
gm030384_Glyma1 WDLPGLAKVGEREWYFFVPRDKKHGSGGRPNRTTEKGFWKATGSDRKIVTLSDPKRIIGL
                ******:::***********::***.****.******:**********::**:***:***

AT2G17040.1     KKTLVFYRGRAPGGSKTDWVMNEFRMPDNCSLPKDVVLCKIYRKATSLKVLEQRA--EME
gm032462_Glyma1 RKTLVFYQGRAPRGCKTDWVMNEYRLPDNCKLPKEIVLCKIYRKATSLKVLEQRAALEEE
gm030384_Glyma1 RKTLVFYQGRAPRGCKTDWVMNEYRLPDNCKLPKEIVLCKIYRKATSLKVLEQRAALEEE
                :******:**** *.********:*:****.***::*******************  * *

AT2G17040.1     AKMNQTCPNSPLS---SSETISFVGKEENMMTSFRAPQVIAMEEAN----KIQMHQENAK
gm032462_Glyma1 REMKQMV-GSPAS-PSSTDTMSFSSPQEEQNMPLPLLQHVLKKESE-TEDMVVPKQEKIT
gm030384_Glyma1 REKKQMVDNSPASPPSSTDTMSFSSPQEEQNLPLPLLQHVLKKESETTEDMVVSKQEKTT
                 : :*   .** *   *::*:** . :*:   .:   * :  :*::     :  :**: .

AT2G17040.1     TEEKQREAETKEPSSSLKLPFG--SLPELQLP-----KPGVEWDQLLSISPWLQNLTP--
gm032462_Glyma1 NQLVLKDTNKSTCGTSLQMPFGKEKLPDLQLPMLSDWTQDTFWAQL--NSPWLQNFTPTN
gm030384_Glyma1 NQLTLKDT-KSTCGTSLQMPFGKEKLPDLQLPMLSDWTQDTFWAQL--NSPWLQNFTPTN
                .:   ::: ..  .:**::***  .**:****     . .. * **   ******:**  

AT2G17040.1     IVNIYW
gm032462_Glyma1 ILNFY-
gm030384_Glyma1 ILNFY-
                *:*:*
BoxShade v3.31 C (beta, 970507) Output
AT2G17040.1     - - - - - - - - - - - - M G K D I E L P G F R F H P T E E E L L D F Y L K N M V Y G K R S S V E V I G F L N I Y R H D P
gm032462_Glyma1    - - - M A T M E D M N N M S G E I T L P G F R F H P T E E E L L D F Y L K N M V V G K K L R Y D V I G F L N I Y Q H D P
gm030384_Glyma1    M I N M A T M E D M S N M S G E I T L P G F R F H P T E E E L L D F Y L K N M V V G K K L R Y D V I G F L N I Y Q H D P
 
AT2G17040.1     W D L P G L S R I G E R E W Y F F V P R E R K H G N G G R P S R T T E K G Y W K A T G S D R K I I S L S E P K R V I G L
gm032462_Glyma1    W D L P G L A K V G E R E W Y F F V P R D K K H G S G G R P N R T T E K G F W K A T G S D R K I V T L S D P K R I I G L
gm030384_Glyma1    W D L P G L A K V G E R E W Y F F V P R D K K H G S G G R P N R T T E K G F W K A T G S D R K I V T L S D P K R I I G L
 
AT2G17040.1     K K T L V F Y R G R A P G G S K T D W V M N E F R M P D N C S L P K D V V L C K I Y R K A T S L K V L E Q R A - - E M E
gm032462_Glyma1    R K T L V F Y Q G R A P R G C K T D W V M N E Y R L P D N C K L P K E I V L C K I Y R K A T S L K V L E Q R A A L E E E
gm030384_Glyma1    R K T L V F Y Q G R A P R G C K T D W V M N E Y R L P D N C K L P K E I V L C K I Y R K A T S L K V L E Q R A A L E E E
 
AT2G17040.1     A K M N Q T C P N S P L S - - - S S E T I S F V G K E E N M M T S F R A P Q V I A M E E A N - - - - K I Q M H Q E N A K
gm032462_Glyma1    R E M K Q M V - G S P A S - P S S T D T M S F S S P Q E E Q N M P L P L L Q H V L K K E S E - T E D M V V P K Q E K I T
gm030384_Glyma1    R E K K Q M V D N S P A S P P S S T D T M S F S S P Q E E Q N L P L P L L Q H V L K K E S E T T E D M V V S K Q E K T T
 
AT2G17040.1     T E E K Q R E A E T K E P S S S L K L P F G - - S L P E L Q L P - - - - - K P G V E W D Q L L S I S P W L Q N L T P - -
gm032462_Glyma1    N Q L V L K D T N K S T C G T S L Q M P F G K E K L P D L Q L P M L S D W T Q D T F W A Q L - - N S P W L Q N F T P T N
gm030384_Glyma1    N Q L T L K D T - K S T C G T S L Q M P F G K E K L P D L Q L P M L S D W T Q D T F W A Q L - - N S P W L Q N F T P T N
 
AT2G17040.1     I V N I Y W
gm032462_Glyma1    I L N F Y -
gm030384_Glyma1    I L N F Y -
 
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