fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G17950.1 LEHRRTLPLFPMHGED at 253/292 in AT2G17950.1
VRPCASLELRLN at 285/292 in AT2G17950.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os019381 TREPETLPLFPVVFVG in 199/289 AT2G17950.1 1st_1st 0.233463035 Ib
PAAGTSLELTLSSYYC in 269/289
Sb014806 TRAPETLPLFPTGGDD in 221/327 AT2G17950.1 1st_1st 0.221789883 Ib
DASAASLELSLSSWCS in 310/327
Gm001691 not found in 229aa AT2G17950.1 1st_1st 0.297665369 Ib
Pt002935 AEKIETLPLFPMHGED in 205/264 AT2G17950.1 1st_1st 0.284046692 Ib
TTSRTSLELSLYSYNG in 249/264
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G17950.1     MEPPQHQHHHHQADQESGNNNNNKSGSGGY----------TCRQTSTRWTPTTEQIKILK
pt002935_POPTR_ -MEPQQQQHQ---NQQQPNEDNNGGAKGNF----------ICRQTSTRWTPTTDQIRILK
gm001691_Glyma0 MMEPQQQQQQAQGSQQQQQNEDGGSGKGGF----------LSRQSSTRWTPTNDQIRILK
Sb014806_Sorbi1 -MAANVGAGR---SAVGGGGGGGAGGTGTAAASGSVATTAVCRPIGSRWTPTPEQIRILK
Os019381_Os04t0 -MDHMQQQQR---QQVGGGGGEEVAGRG---------GVPVCRPSGTRWTPTTEQIKILR
                         :   .          .. *             .*  .:***** :**:**:

AT2G17950.1     ELYYNNAIRSPTADQIQKITARLRQFGKIEGKNVFYWFQNHKARERQKKRFNGTNMTTPS
pt002935_POPTR_ ELYYIKGVRSPNGAEIQQISARLRKYGKIEGKNVFYWFQNHKARERQKKRFTND------
gm001691_Glyma0 ELYYNNGIRSPSAEQIQRISARLRQYGKIEGKNVFYWFQNHKARERQKKRFTSD------
Sb014806_Sorbi1 EFYYGCGIRSPNSEQIQRITAMLRQHGKIEGKNVFYWFQNHKARERQKRRLTNLDVN---
Os019381_Os04t0 ELYYSCGIRSPNSEQIQRIAAMLRQYGRIEGKNVFYWFQNHKARERQKKRLTTLDVT---
                *:**  .:***.. :**:*:* **:.*:********************:*:.        

AT2G17950.1     SSPNSVMMAANDHYHPLLHHHHGVPMQRPANSVNVKLNQDHHLYHHNKPYPSFNN-GNLN
pt002935_POPTR_ -----------------------VPTQQRTT-----LKPE---DYYSYKYSGSNNNPGFS
gm001691_Glyma0 ------------------HNHNNVPMQRPPTNPSAAWKPDLADPIHTTKYCNISSTAGIS
Sb014806_Sorbi1 -----------------------VPTAAAAG-----------------------------
Os019381_Os04t0 -----------------------TTTAAAAD-----------------------------
                                       ..    .                              

AT2G17950.1     HASSGTECGVVNAS-------------NGYMSSHVYGS---MEQ------DCSMNYNNVG
pt002935_POPTR_ SASSSSNTGAVTV---------------GQADNYGYGSV-TMQEKK--NWDCSVPAGGES
gm001691_Glyma0 SASSSVEMVTV-----------------GQMGNYGYGSV-PMEKS---FRDCSISAGGSS
Sb014806_Sorbi1 AADASTHLGVLSLSSPSGAAPPSPTL-GFYAGNGGAGSTVLLDTSS----DCAAMATETC
Os019381_Os04t0 -ADAS-HLAVLSL-SPTAAGATAPSFPGFYVGNGGAVQT---DQANVVNWDCTAMAAEKT
                 *.:. .  .:                    ..    .    :       **:       

AT2G17950.1     G---------GWANMDHHYSS--APYNFFDRAKPLFGLEGHQE--EEECGGDAYLEHRRT
pt002935_POPTR_ M--NNINYG-SRGGIYPYSSS----YTVFD---------QDQEA-AEKIET---------
gm001691_Glyma0 GHVGLINHNLGWVGVDPYNSS--TYANFFDKIRP-----SDQETLEEEAEN---------
Sb014806_Sorbi1 F---LQDYM-GVMGTGSAAAA--SPWACFSSSNTMAAAAARAPTVTRAPET---------
Os019381_Os04t0 F---LQDYM-GVSGVGCAAGAAPTPWA--------------MTTTTREPET---------
                          .  .     .:                         .             

AT2G17950.1     LPLFP---MHGED------------------HING------------GSG----------
pt002935_POPTR_ LPLFP---MHGEDIS-------------TSFNINNVNPDF-YYSSWYGSD----------
gm001691_Glyma0 ------------------------------------------------------------
Sb014806_Sorbi1 LPLFP---TGGDDSQPRRPRHGVPVPVAAGEAIRGGSSSSRYLPFW-GAAPTTASATSIG
Os019381_Os04t0 LPLFPVVFVGGDGAH----RH----------AVHGGFPSN--FQRW-GSA--AATSYTIT
                                                                            

AT2G17950.1     ------------AIWKYGQSEVRPC--------ASLELRLN--------------
pt002935_POPTR_ ---------------DYGNATTSR---------TSLELSLYSYNGQQQDY-----
gm001691_Glyma0 -------------------------------------------------------
Sb014806_Sorbi1 IQQQHQLLQLQEQYSFYSNAMPGTGSQDASAA--SLELSLSSW---CSPYPAGTM
Os019381_Os04t0 VQQHLQ------QHNFYSSSSSQLHSQDGPAAGTSLELTLSSYYCSCSPYPAGSM
BoxShade v3.31 C (beta, 970507) Output
AT2G17950.1     M E P P Q H Q H H H H Q A D Q E S G N N N N N K S G S G G Y - - - - - - - - - - T C R Q T S T R W T P T T E Q I K I L K
pt002935_POPTR_    - M E P Q Q Q Q H Q - - - N Q Q Q P N E D N N G G A K G N F - - - - - - - - - - I C R Q T S T R W T P T T D Q I R I L K
gm001691_Glyma0    M M E P Q Q Q Q Q Q A Q G S Q Q Q Q Q N E D G G S G K G G F - - - - - - - - - - L S R Q S S T R W T P T N D Q I R I L K
Sb014806_Sorbi1    - M A A N V G A G R - - - S A V G G G G G G G A G G T G T A A A S G S V A T T A V C R P I G S R W T P T P E Q I R I L K
Os019381_Os04t0    - M D H M Q Q Q Q R - - - Q Q V G G G G G E E V A G R G - - - - - - - - - G V P V C R P S G T R W T P T T E Q I K I L R
 
AT2G17950.1     E L Y Y N N A I R S P T A D Q I Q K I T A R L R Q F G K I E G K N V F Y W F Q N H K A R E R Q K K R F N G T N M T T P S
pt002935_POPTR_    E L Y Y I K G V R S P N G A E I Q Q I S A R L R K Y G K I E G K N V F Y W F Q N H K A R E R Q K K R F T N D - - - - - -
gm001691_Glyma0    E L Y Y N N G I R S P S A E Q I Q R I S A R L R Q Y G K I E G K N V F Y W F Q N H K A R E R Q K K R F T S D - - - - - -
Sb014806_Sorbi1    E F Y Y G C G I R S P N S E Q I Q R I T A M L R Q H G K I E G K N V F Y W F Q N H K A R E R Q K R R L T N L D V N - - -
Os019381_Os04t0    E L Y Y S C G I R S P N S E Q I Q R I A A M L R Q Y G R I E G K N V F Y W F Q N H K A R E R Q K K R L T T L D V T - - -
 
AT2G17950.1     S S P N S V M M A A N D H Y H P L L H H H H G V P M Q R P A N S V N V K L N Q D H H L Y H H N K P Y P S F N N - G N L N
pt002935_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - V P T Q Q R T T - - - - - L K P E - - - D Y Y S Y K Y S G S N N N P G F S
gm001691_Glyma0    - - - - - - - - - - - - - - - - - - H N H N N V P M Q R P P T N P S A A W K P D L A D P I H T T K Y C N I S S T A G I S
Sb014806_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - V P T A A A A G - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Os019381_Os04t0    - - - - - - - - - - - - - - - - - - - - - - - T T T A A A A D - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT2G17950.1     H A S S G T E C G V V N A S - - - - - - - - - - - - - N G Y M S S H V Y G S - - - M E Q - - - - - - D C S M N Y N N V G
pt002935_POPTR_    S A S S S S N T G A V T V - - - - - - - - - - - - - - - G Q A D N Y G Y G S V - T M Q E K K - - N W D C S V P A G G E S
gm001691_Glyma0    S A S S S V E M V T V - - - - - - - - - - - - - - - - - G Q M G N Y G Y G S V - P M E K S - - - F R D C S I S A G G S S
Sb014806_Sorbi1    A A D A S T H L G V L S L S S P S G A A P P S P T L - G F Y A G N G G A G S T V L L D T S S - - - - D C A A M A T E T C
Os019381_Os04t0    - A D A S - H L A V L S L - S P T A A G A T A P S F P G F Y V G N G G A V Q T - - - D Q A N V V N W D C T A M A A E K T
 
AT2G17950.1     G - - - - - - - - - G W A N M D H H Y S S - - A P Y N F F D R A K P L F G L E G H Q E - - E E E C G G D A Y L E H R R T
pt002935_POPTR_    M - - N N I N Y G - S R G G I Y P Y S S S - - - - Y T V F D - - - - - - - - - Q D Q E A - A E K I E T - - - - - - - - -
gm001691_Glyma0    G H V G L I N H N L G W V G V D P Y N S S - - T Y A N F F D K I R P - - - - - S D Q E T L E E E A E N - - - - - - - - -
Sb014806_Sorbi1    F - - - L Q D Y M - G V M G T G S A A A A - - S P W A C F S S S N T M A A A A A R A P T V T R A P E T - - - - - - - - -
Os019381_Os04t0    F - - - L Q D Y M - G V S G V G C A A G A A P T P W A - - - - - - - - - - - - - - M T T T T R E P E T - - - - - - - - -
 
AT2G17950.1     L P L F P - - - M H G E D - - - - - - - - - - - - - - - - - - H I N G - - - - - - - - - - - - G S G - - - - - - - - - -
pt002935_POPTR_    L P L F P - - - M H G E D I S - - - - - - - - - - - - - T S F N I N N V N P D F - Y Y S S W Y G S D - - - - - - - - - -
gm001691_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb014806_Sorbi1    L P L F P - - - T G G D D S Q P R R P R H G V P V P V A A G E A I R G G S S S S R Y L P F W - G A A P T T A S A T S I G
Os019381_Os04t0    L P L F P V V F V G G D G A H - - - - R H - - - - - - - - - - A V H G G F P S N - - F Q R W - G S A - - A A T S Y T I T
 
AT2G17950.1     - - - - - - - - - - - - A I W K Y G Q S E V R P C - - - - - - - - A S L E L R L N - - - - - - - - - - - - - -
pt002935_POPTR_    - - - - - - - - - - - - - - - D Y G N A T T S R - - - - - - - - - T S L E L S L Y S Y N G Q Q Q D Y - - - - -
gm001691_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb014806_Sorbi1    I Q Q Q H Q L L Q L Q E Q Y S F Y S N A M P G T G S Q D A S A A - - S L E L S L S S W - - - C S P Y P A G T M
Os019381_Os04t0    V Q Q H L Q - - - - - - Q H N F Y S S S S S Q L H S Q D G P A A G T S L E L T L S S Y Y C S C S P Y P A G S M
 
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