fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G17950.1 LEHRRTLPLFPMHGED at 253/292 in AT2G17950.1
VRPCASLELRLN at 285/292 in AT2G17950.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os019381 TREPETLPLFPVVFVG in 199/289 AT2G17950.1 1st_1st 0.233463035 Ib
PAAGTSLELTLSSYYC in 269/289
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G17950.1     MEPPQHQHHHHQADQESGNNNNNKSGSGGY-TCRQTSTRWTPTTEQIKILKELYYNNAIR
Os019381_Os04t0 MDHMQQQ----QRQQVGGGGGEEVAGRGGVPVCRPSGTRWTPTTEQIKILRELYYSCGIR
                *:  *:*    * :* .*...:: :* **  .** :.*************:****. .**

AT2G17950.1     SPTADQIQKITARLRQFGKIEGKNVFYWFQNHKARERQKKRFNGTNMTTPSSSPNSVMMA
Os019381_Os04t0 SPNSEQIQRIAAMLRQYGRIEGKNVFYWFQNHKARERQKKRLTTLDVTTTTAAAAD---A
                **.::***:*:* ***:*:**********************:.  ::**.:::. .   *

AT2G17950.1     ANDHYHPLLHHHHGVPMQRPANSVNVKLNQDHHLYHHNKPYPSFNNGNLNHASSGTECGV
Os019381_Os04t0 DASHLAVLSLSPTAAGATAPS-------------------FPGFYVGN-GGAVQTDQANV
                  .*   *     ..    *:                   :*.*  ** . * .  :..*

AT2G17950.1     VNASNGYMSSHVYGSMEQDCSMNYNNVGG-GWANMDHHYSSAPYNFFDRAKPLFGLEGHQ
Os019381_Os04t0 VNWDCTAMAA------EKTFLQDYMGVSGVGCAA-----GAAP-------TPWAMTTTTR
                ** .   *::      *:    :* .*.* * *      .:**       .*       :

AT2G17950.1     EEEECGGDAYLEHRRTLPLFP-------------MHG---EDHINGGSGAIWKYG-----
Os019381_Os04t0 EPE------------TLPLFPVVFVGGDGAHRHAVHGGFPSNFQRWGSAAATSYTITVQQ
                * *            ******             :**   .:. . **.*  .*      

AT2G17950.1     ---------------QSEVRPCA--SLELRLN--------------
Os019381_Os04t0 HLQQHNFYSSSSSQLHSQDGPAAGTSLELTLSSYYCSCSPYPAGSM
                               :*:  *.*  **** *.
BoxShade v3.31 C (beta, 970507) Output
AT2G17950.1     M E P P Q H Q H H H H Q A D Q E S G N N N N N K S G S G G Y - T C R Q T S T R W T P T T E Q I K I L K E L Y Y N N A I R
Os019381_Os04t0    M D H M Q Q Q - - - - Q R Q Q V G G G G G E E V A G R G G V P V C R P S G T R W T P T T E Q I K I L R E L Y Y S C G I R
 
AT2G17950.1     S P T A D Q I Q K I T A R L R Q F G K I E G K N V F Y W F Q N H K A R E R Q K K R F N G T N M T T P S S S P N S V M M A
Os019381_Os04t0    S P N S E Q I Q R I A A M L R Q Y G R I E G K N V F Y W F Q N H K A R E R Q K K R L T T L D V T T T T A A A A D - - - A
 
AT2G17950.1     A N D H Y H P L L H H H H G V P M Q R P A N S V N V K L N Q D H H L Y H H N K P Y P S F N N G N L N H A S S G T E C G V
Os019381_Os04t0    D A S H L A V L S L S P T A A G A T A P S - - - - - - - - - - - - - - - - - - - F P G F Y V G N - G G A V Q T D Q A N V
 
AT2G17950.1     V N A S N G Y M S S H V Y G S M E Q D C S M N Y N N V G G - G W A N M D H H Y S S A P Y N F F D R A K P L F G L E G H Q
Os019381_Os04t0    V N W D C T A M A A - - - - - - E K T F L Q D Y M G V S G V G C A A - - - - - G A A P - - - - - - - T P W A M T T T T R
 
AT2G17950.1     E E E E C G G D A Y L E H R R T L P L F P - - - - - - - - - - - - - M H G - - - E D H I N G G S G A I W K Y G - - - - -
Os019381_Os04t0    E P E - - - - - - - - - - - - T L P L F P V V F V G G D G A H R H A V H G G F P S N F Q R W G S A A A T S Y T I T V Q Q
 
AT2G17950.1     - - - - - - - - - - - - - - - Q S E V R P C A - - S L E L R L N - - - - - - - - - - - - - -
Os019381_Os04t0    H L Q Q H N F Y S S S S S Q L H S Q D G P A A G T S L E L T L S S Y Y C S C S P Y P A G S M
 
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