fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G17950.1 LEHRRTLPLFPMHGED at 253/292 in AT2G17950.1
VRPCASLELRLN at 285/292 in AT2G17950.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb014806 TRAPETLPLFPTGGDD in 221/327 AT2G17950.1 1st_1st 0.221789883 Ib
DASAASLELSLSSWCS in 310/327
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G17950.1     MEPPQHQHHHHQADQESGNNNNNKSGSGG----------------YTCRQTSTRWTPTTE
Sb014806_Sorbi1 ----------MAANVGAGRSAVGGGGGGGAGGTGTAAASGSVATTAVCRPIGSRWTPTPE
                            *:  :*..  . .*.**                 .**  .:*****.*

AT2G17950.1     QIKILKELYYNNAIRSPTADQIQKITARLRQFGKIEGKNVFYWFQNHKARERQKKRFNGT
Sb014806_Sorbi1 QIRILKEFYYGCGIRSPNSEQIQRITAMLRQHGKIEGKNVFYWFQNHKARERQKRRLTNL
                **:****:**. .****.::***:*** ***.**********************:*:.. 

AT2G17950.1     NMTTPSSSPNSVMMAANDHYHPLLHHHHGV-PMQRPANSVNVKLNQDHHLYHHNKPYPSF
Sb014806_Sorbi1 DVNVPTAAAAGAADAST---------HLGVLSLSSPSGAA--------------PPSPTL
                ::..*:::. ..  *:.         * ** .:. *:.:.               * *::

AT2G17950.1     NNGNLNHASSGTECGVVNASNGYMSSHVYGSMEQDCS---------MNYNNV-GGGWANM
Sb014806_Sorbi1 G---------------FYAGNGGAGSTVLLDTSSDCAAMATETCFLQDYMGVMGTGSAA-
                .               . *.**  .* *  . ..**:          :* .* * * *  

AT2G17950.1     DHHYSSAPYNFFDRAKPLFGLEGHQEEEECGGDAYLEHRRTLPLFPMHGEDH--------
Sb014806_Sorbi1 ----AASPWACFSSSNTMAAAAAR-------APTVTRAPETLPLFPTGGDDSQPRRPRHG
                    :::*:  *. ::.: .  .:       . :  .  .******  *:*         

AT2G17950.1     ----------INGGSGA-----IW-------------------------KYG-QSEVRP-
Sb014806_Sorbi1 VPVPVAAGEAIRGGSSSSRYLPFWGAAPTTASATSIGIQQQHQLLQLQEQYSFYSNAMPG
                          *.***.:     :*                         :*.  *:. * 

AT2G17950.1     -------CASLELRLN-----------
Sb014806_Sorbi1 TGSQDASAASLELSLSSWCSPYPAGTM
                       .***** *.
BoxShade v3.31 C (beta, 970507) Output
AT2G17950.1     M E P P Q H Q H H H H Q A D Q E S G N N N N N K S G S G G - - - - - - - - - - - - - - - - Y T C R Q T S T R W T P T T E
Sb014806_Sorbi1    - - - - - - - - - - M A A N V G A G R S A V G G G G G G G A G G T G T A A A S G S V A T T A V C R P I G S R W T P T P E
 
AT2G17950.1     Q I K I L K E L Y Y N N A I R S P T A D Q I Q K I T A R L R Q F G K I E G K N V F Y W F Q N H K A R E R Q K K R F N G T
Sb014806_Sorbi1    Q I R I L K E F Y Y G C G I R S P N S E Q I Q R I T A M L R Q H G K I E G K N V F Y W F Q N H K A R E R Q K R R L T N L
 
AT2G17950.1     N M T T P S S S P N S V M M A A N D H Y H P L L H H H H G V - P M Q R P A N S V N V K L N Q D H H L Y H H N K P Y P S F
Sb014806_Sorbi1    D V N V P T A A A A G A A D A S T - - - - - - - - - H L G V L S L S S P S G A A - - - - - - - - - - - - - - P P S P T L
 
AT2G17950.1     N N G N L N H A S S G T E C G V V N A S N G Y M S S H V Y G S M E Q D C S - - - - - - - - - M N Y N N V - G G G W A N M
Sb014806_Sorbi1    G - - - - - - - - - - - - - - - F Y A G N G G A G S T V L L D T S S D C A A M A T E T C F L Q D Y M G V M G T G S A A -
 
AT2G17950.1     D H H Y S S A P Y N F F D R A K P L F G L E G H Q E E E E C G G D A Y L E H R R T L P L F P M H G E D H - - - - - - - -
Sb014806_Sorbi1    - - - - A A S P W A C F S S S N T M A A A A A R - - - - - - - A P T V T R A P E T L P L F P T G G D D S Q P R R P R H G
 
AT2G17950.1     - - - - - - - - - - I N G G S G A - - - - - I W - - - - - - - - - - - - - - - - - - - - - - - - - K Y G - Q S E V R P -
Sb014806_Sorbi1    V P V P V A A G E A I R G G S S S S R Y L P F W G A A P T T A S A T S I G I Q Q Q H Q L L Q L Q E Q Y S F Y S N A M P G
 
AT2G17950.1     - - - - - - - C A S L E L R L N - - - - - - - - - - -
Sb014806_Sorbi1    T G S Q D A S A A S L E L S L S S W C S P Y P A G T M
 
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