fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G17950.1 LEHRRTLPLFPMHGED at 253/292 in AT2G17950.1
VRPCASLELRLN at 285/292 in AT2G17950.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm001691 not found in 229aa AT2G17950.1 1st_1st 0.297665369 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G17950.1     MEPPQHQHHHHQADQESGNNNNNKSGSGGYTCRQTSTRWTPTTEQIKILKELYYNNAIRS
gm001691_Glyma0 MMEPQQQQQQAQGSQQQQQNEDGGSGKGGFLSRQSSTRWTPTNDQIRILKELYYNNGIRS
                *  **:*::: *..*:. :*::. **.**: .**:*******.:**:*********.***

AT2G17950.1     PTADQIQKITARLRQFGKIEGKNVFYWFQNHKARERQKKRFNGTNMTTPSSSPNSVMMAA
gm001691_Glyma0 PSAEQIQRISARLRQYGKIEGKNVFYWFQNHKARERQKKRFTSD----------------
                *:*:***:*:*****:*************************..                 

AT2G17950.1     NDHYHPLLHHHHGVPMQRPANSVNVKLNQDHHLYHHNKPYPSFNN-GNLNHASSGTECGV
gm001691_Glyma0 --------HNHNNVPMQRPPTNPSAAWKPDLADPIHTTKYCNISSTAGISSASSSVEMVT
                        *:*:.******... ..  : *     *.. * .:.. ..:. ***..*  .

AT2G17950.1     VNASNGYMSSHVYGS--MEQ---DCSMNYNNVGG---------GWANMDHHYSSAPYNFF
gm001691_Glyma0 V----GQMGNYGYGSVPMEKSFRDCSISAGGSSGHVGLINHNLGWVGVDPYNSSTYANFF
                *    * *..: ***  **:   ***:. .. .*         **..:* : **:  ***

AT2G17950.1     DRAKPLFGLEGHQE--EEECGGDAYLEHRRTLPLFPMHGEDHINGGSGAIWKYGQSEVRP
gm001691_Glyma0 DKIRP-----SDQETLEEEAEN--------------------------------------
                *: :*     ..**  ***. .                                      

AT2G17950.1     CASLELRLN
gm001691_Glyma0 ---------
BoxShade v3.31 C (beta, 970507) Output
AT2G17950.1     M E P P Q H Q H H H H Q A D Q E S G N N N N N K S G S G G Y T C R Q T S T R W T P T T E Q I K I L K E L Y Y N N A I R S
gm001691_Glyma0    M M E P Q Q Q Q Q Q A Q G S Q Q Q Q Q N E D G G S G K G G F L S R Q S S T R W T P T N D Q I R I L K E L Y Y N N G I R S
 
AT2G17950.1     P T A D Q I Q K I T A R L R Q F G K I E G K N V F Y W F Q N H K A R E R Q K K R F N G T N M T T P S S S P N S V M M A A
gm001691_Glyma0    P S A E Q I Q R I S A R L R Q Y G K I E G K N V F Y W F Q N H K A R E R Q K K R F T S D - - - - - - - - - - - - - - - -
 
AT2G17950.1     N D H Y H P L L H H H H G V P M Q R P A N S V N V K L N Q D H H L Y H H N K P Y P S F N N - G N L N H A S S G T E C G V
gm001691_Glyma0    - - - - - - - - H N H N N V P M Q R P P T N P S A A W K P D L A D P I H T T K Y C N I S S T A G I S S A S S S V E M V T
 
AT2G17950.1     V N A S N G Y M S S H V Y G S - - M E Q - - - D C S M N Y N N V G G - - - - - - - - - G W A N M D H H Y S S A P Y N F F
gm001691_Glyma0    V - - - - G Q M G N Y G Y G S V P M E K S F R D C S I S A G G S S G H V G L I N H N L G W V G V D P Y N S S T Y A N F F
 
AT2G17950.1     D R A K P L F G L E G H Q E - - E E E C G G D A Y L E H R R T L P L F P M H G E D H I N G G S G A I W K Y G Q S E V R P
gm001691_Glyma0    D K I R P - - - - - S D Q E T L E E E A E N - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT2G17950.1     C A S L E L R L N
gm001691_Glyma0    - - - - - - - - -
 
0